Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., alpha-ketoglutarate TRAP transporter, solute receptor component (from data) from Shewanella amazonensis SB2B

 Score =  317 bits (811), Expect = 4e-91
 Identities = 169/328 (51%), Positives = 226/328 (68%), Gaps = 5/328 (1%)

Query: 6   TLIAASILA-VTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKAC 64
           TL  AS+LA V  F+  A  +P EI  KFSHV   +  PKG  A   ++ V   + G+  
Sbjct: 14  TLGKASLLATVLGFSFGAVAEPVEI--KFSHVV-AENTPKGQMALKFKELVESRLPGEYK 70

Query: 65  MQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDAVDRFQ 124
           + VFPNS L+ D+  L ALL  DVQL APSLSKFE++TKK ++FDLPFLFED+DAVDRFQ
Sbjct: 71  VSVFPNSQLFGDNNELAALLLNDVQLVAPSLSKFERYTKKLQVFDLPFLFEDMDAVDRFQ 130

Query: 125 SSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLVAQFE 184
            S  G++L N+M+R+G+ GL + HNGMKQ SAN  + +P DA G KFR+  SDV+ AQFE
Sbjct: 131 QSEAGQQLLNSMSRKGLVGLGYLHNGMKQFSANNALSLPGDAAGKKFRIMPSDVIAAQFE 190

Query: 185 QIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVTS 244
            +GA P K  F+E +  LQT+ IDGQENTWSNIY +K++EVQ   TE+NHG+LDY++VTS
Sbjct: 191 AVGAIPVKKPFSEVFTLLQTRAIDGQENTWSNIYSKKFYEVQTHITESNHGVLDYMLVTS 250

Query: 245 SKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGV-VRTLTPEQRQQW 303
             +W  LP D R+   + ++E     N  + +    ++Q I+++  V + TLTPEQRQ W
Sbjct: 251 ETFWKSLPKDKREIIKQSMDEAVALGNKLALEKANEDRQLILDSKRVELVTLTPEQRQAW 310

Query: 304 VDALKPVWQKFEKDIGADLIEAALAANQ 331
           V+A++PVW +FE  IG DLIEAA +AN+
Sbjct: 311 VNAMRPVWSQFEDKIGKDLIEAAESANK 338