Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., TRAP dicarboxylate transporter- DctP subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  233 bits (594), Expect = 5e-66
 Identities = 136/331 (41%), Positives = 188/331 (56%), Gaps = 5/331 (1%)

Query: 5   LTLIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKAC 64
           L++    IL        A      IVIKFSHV   D  PKG AA + +K   E   G+  
Sbjct: 3   LSVFMGLILGGVMIAGGAQAADEPIVIKFSHVVAPDT-PKGKAAEMFKKLAEEGTAGRVK 61

Query: 65  MQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKF-TKKYRIFDLPFLFEDVDAVDRF 123
           ++V+PNS LY D + LEAL  G VQ+ APSL+KF     K++ +FDLP++F   D +   
Sbjct: 62  VEVYPNSQLYKDKEELEALQLGAVQMLAPSLAKFGPLGVKEFEVFDLPYIFPTKDVLRAV 121

Query: 124 QSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKPILVPADAKGLKFRVQASDVLVAQF 183
                G  L   +  RG+KGL +W NG K  SANKP+L P D KG+K R+Q+S VL A+ 
Sbjct: 122 TDGPIGASLLKKLEGRGIKGLAYWDNGFKIFSANKPLLKPDDLKGVKMRIQSSKVLDAEM 181

Query: 184 EQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVT 243
             +GA PQ M+F+E Y  LQT V+DG EN  SN+Y QK  EVQ   T TNHG L Y V+ 
Sbjct: 182 RALGALPQVMAFSEVYQALQTGVVDGTENPPSNMYTQKMHEVQKHATLTNHGYLGYAVIV 241

Query: 244 SSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYIIEAGGVVRTLTP--EQRQ 301
           + K+W+GLPAD+R      + + T   NA + + E  +    ++A G      P  ++ +
Sbjct: 242 NKKFWEGLPADIRAPLETAMADSTKFANAIAQQ-ENDDSLAAMKASGKTEFHMPSEDELK 300

Query: 302 QWVDALKPVWQKFEKDIGADLIEAALAANQK 332
            W DAL PV ++ E  +G DLIE+  A +++
Sbjct: 301 AWQDALLPVHKEMEGRVGKDLIESIYAVSKQ 331