Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., TRAP transporter, subunit DctP from Phaeobacter inhibens DSM 17395

 Score = 77.8 bits (190), Expect = 4e-19
 Identities = 66/288 (22%), Positives = 127/288 (44%), Gaps = 25/288 (8%)

Query: 51  LEKRVNEEMNGKACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDL 110
           L++ +    NGK  +++ P   L     +++ +  G +Q A  SLS F  F     + ++
Sbjct: 82  LKENIQNATNGKIYVKLAPGGQLGAGGALVQKVQGGTIQAAQHSLSNFAPFASTVDLINM 141

Query: 111 PFLFEDVDAVDRFQSSAKGE----ELKNAMTRRGVKGLEFWHNGMKQISANK---PILVP 163
           P+L     +  RF +    +    E+   +   G K L + +   + ++  K    +  P
Sbjct: 142 PYL---CGSNQRFTNLVTSDFWNAEVHPKVEANGFKALFYVNIDPRVVAVRKGGNAVTSP 198

Query: 164 ADAKGLKFRVQASDVLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYF 223
            D  G+KFRV  S +L   +  +GANP  +++ ET   ++  V D  + +   +Y   + 
Sbjct: 199 GDMAGVKFRVPGSKMLQQYYRMVGANPTPVAWGETPSAIKQGVADALDPSVGALYVFGFK 258

Query: 224 EVQDGTTETNHGILDYLVVTSSKWWDGLPADVRDQFAKILNEVTIERN------AESNKV 277
           ++    T T       +   + +W++ LPADV+D      +E+T  +N      A +  +
Sbjct: 259 DILSHVTFTQAVPDSQVYSCNLEWFNSLPADVQDG-VMWGSEMTAHQNLSKVPSARAYAM 317

Query: 278 EELNKQYIIEAGGVVRTLTPEQRQQWVDA---LKPVWQKFEKDIGADL 322
            EL K     AG    TL+ +Q  +W +A    +  W  F+ ++   +
Sbjct: 318 AELAK-----AGVAFHTLSDDQLGEWQEAGGYQRSEWDTFKTELAGSM 360