Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Dechlorosoma suillum PS

 Score =  232 bits (591), Expect = 1e-65
 Identities = 127/299 (42%), Positives = 178/299 (59%), Gaps = 3/299 (1%)

Query: 29  IVIKFSHVTNTDKHPKGIAASLLEKRVNEEMNGKACMQVFPNSTLYDDDKVLEALLNGDV 88
           IVIKFSHV   D  PKG+AA    K+  E   GK  ++V+PNS LY D + +EAL  G V
Sbjct: 25  IVIKFSHVVAVDT-PKGMAADFFAKKAAELTKGKVKVEVYPNSQLYKDKEEMEALQLGAV 83

Query: 89  QLAAPSLSKFEKF-TKKYRIFDLPFLFEDVDAVDRFQSSAKGEELKNAMTRRGVKGLEFW 147
           Q+ APSL+KF     +++  FDLP++F++ + + +  +   G  L   +  +G+KGL +W
Sbjct: 84  QMLAPSLAKFGPLGVREFEAFDLPYIFDNYEELHKVTTGPVGAALLAKLEPKGIKGLAYW 143

Query: 148 HNGMKQISANKPILVPADAKGLKFRVQASDVLVAQFEQIGANPQKMSFAETYGGLQTKVI 207
            NG K  SAN PI  PAD KG K R+Q+S VL  +   +GA PQ M+F+E Y  LQT V+
Sbjct: 144 DNGFKSFSANTPIKTPADLKGKKMRIQSSKVLEEEMRSLGALPQVMAFSEVYQALQTGVV 203

Query: 208 DGQENTWSNIYGQKYFEVQDGTTETNHGILDYLVVTSSKWWDGLPADVRDQFAKILNEVT 267
           DG EN  SN+Y QK  EVQ   T T+HG L Y V+ + K+WDGLPADVR Q    + + T
Sbjct: 204 DGTENPISNLYTQKMHEVQKHLTLTDHGYLGYAVIVNKKFWDGLPADVRGQLETAMKDAT 263

Query: 268 IERNAESNKVEELNKQYIIEAGGV-VRTLTPEQRQQWVDALKPVWQKFEKDIGADLIEA 325
              N  + +  + + + + ++G   V   T E+R+ +  AL PV  K    IG DLI++
Sbjct: 264 TYANKIAKEQNDKDLESVKKSGKTQVYVPTKEEREAFKKALTPVHAKMADRIGKDLIQS 322