Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., TRAP dicarboxylate family transporter (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 67/243 (27%), Positives = 114/243 (46%), Gaps = 6/243 (2%)

Query: 48  ASLLEKRVNEEMNGKACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRI 107
           A LL +R ++  N    + +  +++L  +  +L+ +  G VQ+A  +    + F  +   
Sbjct: 60  AQLLAERSDKRFN----VVLHHSASLGTETDILQQVQLGAVQMAIVTTGTLDAFVPEMAA 115

Query: 108 FDLPFLFEDVDAVDRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISAN-KPILVPADA 166
            D PFLF D    DR      G  L + ++  G KGL F  NG + ++ + +P++ P D 
Sbjct: 116 LDFPFLFTDTTTADRVLDGPVGRGLLDRLSTAGFKGLHFSENGFRHLTNSIRPVMTPDDV 175

Query: 167 KGLKFRVQASDVLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQ 226
           +GLK RV  S V    +  +GANP  M +   Y  LQ   +DGQEN    I   +  EVQ
Sbjct: 176 RGLKIRVMESQVHRELWRTLGANPTPMGW-PIYAELQQGTLDGQENPLWVIAEYRLNEVQ 234

Query: 227 DGTTETNHGILDYLVVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNKVEELNKQYII 286
              + T H    +  + +  W++ LPA+ R   A  + +  + +   S + +    + + 
Sbjct: 235 KHLSLTGHVYSTHTDLANLAWFEALPANDRRLLASCMQDAALWQRTWSRQRDAAYLEQLR 294

Query: 287 EAG 289
            AG
Sbjct: 295 TAG 297