Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., TRAP dicarboxylate family transporter (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  120 bits (301), Expect = 5e-32
 Identities = 93/300 (31%), Positives = 144/300 (48%), Gaps = 11/300 (3%)

Query: 43  PKGIAASLLEKRVNEEMNGKACMQVFPNSTLYDDDKVLE--ALLNGDVQLAAPSLSKFEK 100
           P G AA      V E   G+  ++V+P ++L   D+  E  A+  G + +A  S   +  
Sbjct: 39  PWGRAAERWANLVRENTEGRINIKVYPGTSLVGGDQTKEFTAIRQGVIDMAVGSSINWSP 98

Query: 101 FTKKYRIFDLPFLFEDVDAVDRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISANKP- 159
             K+  +F LPFL  D  A D   +     ++   + ++GV  L    NG +++S +K  
Sbjct: 99  QVKQLNLFSLPFLMPDEKAFDALTTGPVAADIFAILDKQGVVPLAIGENGFRELSNSKVN 158

Query: 160 ILVPADAKGLKFRVQASDVLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYG 219
           +  PAD KGLK RV  S + +  F  +GANP +MS+A+    L TK +DGQEN  S    
Sbjct: 159 VTSPADLKGLKIRVVGSPIFIDGFTALGANPTQMSWADAQPALATKAVDGQENPLSVFNA 218

Query: 220 QKYFEVQDGTTETNHGILDYL-VVTSSKWWDGLPADVRDQFAKILNEVTIERNAESNK-- 276
            K   V+         + D L  V S K W+      R   A+   +   E   ++ K  
Sbjct: 219 AKLHTVEQKYLTLWGYMADPLFYVVSKKVWEEWSEADRAIVAEAAKQTAAENLIDARKGI 278

Query: 277 -VEELNKQYIIEAGGV-VRTLTPEQRQQWVDALKPVWQKFEKDIGADLI---EAALAANQ 331
             E+ +    IE  GV V  LT EQR+ +  A +PV+ K+ + +G DL+   E A+AA++
Sbjct: 279 TPEDDSLLKEIEKNGVTVTRLTDEQRKPFQKATRPVFDKWAEVVGKDLVKKAEDAIAASR 338