Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., TRAP dicarboxylate transporter, DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  129 bits (324), Expect = 1e-34
 Identities = 104/330 (31%), Positives = 160/330 (48%), Gaps = 32/330 (9%)

Query: 7   LIAASILAVTSFNAAANCDPGEIVIKFSHVTNTDKHPKGIAASLLEKRVN---EEMNGK- 62
           L+ A    VT   A+A     E+V++F HV        G   SL E  VN   E  NGK 
Sbjct: 7   LLGAVAACVTPAIASA-----EMVLRFGHV--------GAPGSLFEASVNAFAECANGKL 53

Query: 63  ---ACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLPFLFEDVDA 119
              A +Q F  S L +D ++L+ L  G V ++ PS S       ++ IF++P++  D + 
Sbjct: 54  GDAAEVQTFGASQLGNDREMLQKLKLGQVHMSLPS-SVMSSVAPEFGIFEMPYIIRDREH 112

Query: 120 VDRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISAN-KPILVPADAKGLKFRVQASDV 178
           + R Q+   G+  + A   +G + + +  NG + I+ N +PI  P D  G+K R    + 
Sbjct: 113 MKRVQAEL-GDTFQEAALGQGYRIIGYMENGFRHITNNVRPINTPEDLAGVKLRTPNGEW 171

Query: 179 LVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTTETNHGILD 238
            V  F++ GANP  MSF+E +  LQTKVIDGQEN ++ I   K+ EVQ   + T H    
Sbjct: 172 RVKMFQEYGANPTPMSFSEVFTALQTKVIDGQENPYAQIASAKFQEVQSYLSITGHVYTP 231

Query: 239 YLVVTSSKWWDGLPADVRDQFAKILNEV--TIERNAESNKVEELNKQYIIEAGGVVRTLT 296
             V+ +   W   P DVR        E   T+   A + + E L+   +I+A GV   + 
Sbjct: 232 AYVLVAENQWQSWPEDVRAALESCGTETQDTVYEIAANLETELLD---VIKAAGV--EVN 286

Query: 297 PEQRQQWVDALKPVWQKFEKDI--GADLIE 324
              +  +V A  P++  F   +   A++IE
Sbjct: 287 EADKAAFVAASTPIYDAFAAQVEGAAEMIE 316