Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., TRAP dicarboxylate transporter, DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  120 bits (300), Expect = 6e-32
 Identities = 77/216 (35%), Positives = 109/216 (50%), Gaps = 2/216 (0%)

Query: 52  EKRVNEEMNGKACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSLSKFEKFTKKYRIFDLP 111
           E+R+     G+  +Q+F ++TL  ++ VL+ L  G  Q A+ S S   +   +  IFDLP
Sbjct: 47  EQRLEAAAPGEIDVQIFMSNTLGKEEDVLQGLGFGTHQ-ASLSASAVAQVNNRTSIFDLP 105

Query: 112 FLFEDVDAVDRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQISAN-KPILVPADAKGLK 170
           +LFED  AV  F  S  GE L +     G+     W NG +QI+ N +PI+ PAD  GLK
Sbjct: 106 YLFEDRAAVQTFIDSPAGEMLADGFDVTGMVLAAMWDNGFRQITNNVRPIVTPADLDGLK 165

Query: 171 FRVQASDVLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTWSNIYGQKYFEVQDGTT 230
            R   +   V  F  +GAN   +SF E Y  L    IDGQEN  + +   K FEVQ   +
Sbjct: 166 IRTPTNRQRVEMFNTLGANATPLSFGEVYSALDQGTIDGQENPANVVETAKLFEVQGYMS 225

Query: 231 ETNHGILDYLVVTSSKWWDGLPADVRDQFAKILNEV 266
            TNH  L    V    + + L  ++R+    +  EV
Sbjct: 226 LTNHVYLPTFFVIGEPFLNSLTPELRETVISVAKEV 261