Pairwise Alignments

Query, 332 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., C4-dicarboxylate-binding protein from Caulobacter crescentus NA1000

 Score =  121 bits (304), Expect = 2e-32
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 7/280 (2%)

Query: 40  DKHPKGI----AASLLEKRVNEEMNGKACMQVFPNSTLYDDDKVLEALLNGDVQLAAPSL 95
           D HP G     A +     +++  NG+  +Q +    L ++   LE  + G + +   +L
Sbjct: 33  DSHPAGYPTVEAVNHFGALISQRTNGRLRLQNYAGGQLGEEKDTLEITVFGGLDINRVNL 92

Query: 96  SKFEKFTKKYRIFDLPFLFEDVDAVDRFQSSAKGEELKNAMTRRGVKGLEFWHNGMKQI- 154
           +          +  LPFLF+  D + R    A G  + N++ R G+ GL F+ +G +   
Sbjct: 93  APLNPIEPLTLVPSLPFLFQSTDHMRRSLDGAPGRTILNSLERHGLIGLAFYDSGERSFY 152

Query: 155 SANKPILVPADAKGLKFRVQASDVLVAQFEQIGANPQKMSFAETYGGLQTKVIDGQENTW 214
           +   PI  PAD +GLK RVQ S++ +A  + +GA+P  MS+ E +  L   VIDG EN W
Sbjct: 153 NTRGPIRTPADMRGLKLRVQTSNLPIAMVQALGASPIPMSYGEVFQALVQGVIDGAENNW 212

Query: 215 SNIYGQKYFEVQDGTTETNHGILDYLVVTSSKWWDGLPADVRDQFAKILNEVTIERNAES 274
            +    ++FEV    + T H +   ++V S++ W  L +  R+       E         
Sbjct: 213 PSYQDSRHFEVARFYSVTRHVMAPEVLVASARTWAKLSSSDREIIRDAATESVPFMRRLW 272

Query: 275 NKVEELNKQYIIEAGGVVRTLTPEQRQQWVDALKPVWQKF 314
              E   +Q +I+AG  V  +    R  +  A+ PVW +F
Sbjct: 273 EARETSARQAMIDAG--VEVVEDLDRSAFQAAMAPVWDRF 310