Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data) from Pseudomonas stutzeri RCH2

 Score = 53.9 bits (128), Expect = 4e-12
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)

Query: 14  EQSWFSRVGQFTDSIEEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMV 73
           E  +  RV Q  D + ++L+A  M  M ++ F++V++RY F      A E +   F W+V
Sbjct: 206 EPIYSGRVAQHFDRLTDWLMAALMAFMVIVVFSSVVLRYAFGTGWTGAEELSRLAFVWLV 265

Query: 74  LVGASFGVKRHFHIGVDVLINIAPARLRKL-----YALVAVACCLAFSILLLIGSWN 125
            VG +  ++R   +   +L +  P   R++     + LVA A CLA       G WN
Sbjct: 266 FVGVASSMRRGELMSFSMLRDRFPRLFRRVVDSLSWLLVAAASCLA-----AWGGWN 317