Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., C4-dicarboxylate transport system, permease small protein transmembrane from Sinorhizobium meliloti 1021

 Score = 45.8 bits (107), Expect = 5e-10
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 9/136 (6%)

Query: 20  RVGQFTDSIEEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLVGASF 79
           R+    D++   +    +   T +    VI RY  +    W+ E    +  W+  +GA  
Sbjct: 10  RISNAIDNVARAVGGLAIATFTAIIVYVVICRYALSFTPRWSEEIPRLLLVWVTFIGAVS 69

Query: 80  GVKRHFHI--GVDVLINIAPARLRKLYALVAVACCLAFSILLLIGSWNYWHPFITERAW- 136
              R+ H+  G+  L+ +AP R R L A++A    L F ++++   W      IT   W 
Sbjct: 70  AFVRNTHLCAGLTDLL-VAPGRFRSLLAVLARLASLLFLVVVIWSGWK-----ITVLTWS 123

Query: 137 YETDDIPMPDMLQFLA 152
           +ET  +  P  L +LA
Sbjct: 124 HETTVLSWPAGLVYLA 139