Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 213 a.a., alpha-ketoglutarate TRAP transporter, small permease component (from data) from Shewanella amazonensis SB2B

 Score =  100 bits (248), Expect = 3e-26
 Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 4/185 (2%)

Query: 29  EEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLVGASFGVKRHFHIG 88
           EE ++   +  MTLL F  VI R+ FN   LW  E T+    W VL G S+G+K   HIG
Sbjct: 10  EEGVLNLLITLMTLLVFMEVIARFFFNTGFLWIQELTLTFCGWFVLFGMSYGIKVGAHIG 69

Query: 89  VDVLINIAPARLRKLYALVAVACCLAFSILLLIGSWNYWHPFITERAWYETDDIPMPDML 148
           VD  +       R++ AL+AV+ CL +  + L G+W+Y           E  D+P   M 
Sbjct: 70  VDAFVKKLKPGARRISALLAVSICLIYCAMFLKGTWDYLSQIYHIGIGMEDLDVPSVLMK 129

Query: 149 QFLADWVNEGERYE----KLPRFIPYAALPIGMALLTFRFLQIAWQIITGKLDRMIAGHE 204
           Q   D+  +  R +     +P +I  + L +G  +LT+RFL++A  I  G  +      E
Sbjct: 130 QMSEDFAWDVMRIDPEDPAIPLWISQSILLLGFVMLTWRFLELAVAIFRGTSNGFSFHDE 189

Query: 205 AEEDL 209
           A+E +
Sbjct: 190 AKESM 194