Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., Tripartite ATP-independent periplasmic transporter, DctQ component (NCBI) from Rhodospirillum rubrum S1H

 Score = 84.7 bits (208), Expect = 1e-21
 Identities = 67/212 (31%), Positives = 100/212 (47%), Gaps = 29/212 (13%)

Query: 26  DSIEEFLIAFFMGAMTLLTFANVIMRYLFNDNIL----------WALEGTVFMFAWMVLV 75
           D +EE LIAF M A TL+ F  V+ RY      L          WA E  + +F WM   
Sbjct: 5   DHLEEALIAFLMAAATLIIFVAVVHRYASGVAFLYPYVGHLHFAWAQELCIILFVWMAKF 64

Query: 76  GASFGVKRHFHIGVDVLINIAPARLRKLYALVAVACCLAFS--ILLLIGSW---NYWHPF 130
           GA++GV+   H+GVDV+IN    R R ++ +  +    AF+  + +L GS+   N  H  
Sbjct: 65  GAAYGVRTGIHVGVDVVINRLKPRARGVFIVFGLLAGAAFTGCVAVLGGSFVWDNGAHYA 124

Query: 131 ITERAWYETDDIPMPDMLQFLADWVNEGERYEKLPRFIPYAALPIGMALLTFRFLQIAWQ 190
                  E  D+    +   L +W          P +I Y+A+P+G +L+ FRFLQ+   
Sbjct: 125 FVTALGLEIGDLYEGPITADL-EW----------PTWIVYSAIPLGSSLMCFRFLQVCVG 173

Query: 191 II-TGKLDRMIAGHEAEEDLEALKAELSEAGE 221
            + TG+L     GH   E L+  K +   A +
Sbjct: 174 FLRTGELPHHDHGH--VEGLDEDKTDAQRAAQ 203