Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., TRAP transporter large permease subunit from Rhodopseudomonas palustris CGA009

 Score = 56.2 bits (134), Expect = 1e-12
 Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 24/139 (17%)

Query: 42  LLTFANVIMRYLFNDNILWALEGTVFMFAWMVLVGASFGVKRHFHIGVDVLINIAPARLR 101
           ++ FA V+ RY+F+  ++W+ E    +F W+ + GA+   +R  H+ +  ++  A  RLR
Sbjct: 48  VVLFAGVVSRYVFHSPLIWSDELASILFLWLAMFGAAVAFRRGEHMRMTAMVAGASPRLR 107

Query: 102 KLYALVAVACCLAFSILLLIGSWNYWHPFITERAWYETDDIPMPDMLQFLADWVNEGERY 161
               LV +   LAF +L+   ++ Y          YE   I  P  L     W       
Sbjct: 108 AWLDLVGICAALAFLLLIAAPAYEY---------AYEESYITTP-ALSLANSW------- 150

Query: 162 EKLPRFIPYAALPIGMALL 180
                    AALP+G+AL+
Sbjct: 151 -------RAAALPVGIALM 162