Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 183 a.a., TRAP transporter small permease from Rhodopseudomonas palustris CGA009

 Score = 44.3 bits (103), Expect = 2e-09
 Identities = 38/146 (26%), Positives = 57/146 (39%), Gaps = 24/146 (16%)

Query: 47  NVIMRYLFNDNILWALEGTVFMFAWMVLVGASFGVKRHFHIGVDVLINIAPARLRKLYAL 106
           +V +R LF+    W  E  VF+      + A+F   +  HIG++    + P  + ++  L
Sbjct: 53  SVAVRSLFHSATYWQDEAAVFLLVGATFLTAAFVQSQRGHIGIEAFTGLLPPAVNRVRLL 112

Query: 107 VAVACCLAFSILLLIGSWNYWHPFITERAWYETDDIPMPDMLQFLADWVNEGERYEKLPR 166
           +     LAF       SW   H    +     ++ I  P                   P 
Sbjct: 113 LVDVASLAFCGFFAWKSWTLTHEAYVDGQ--VSNSIWSP-------------------PL 151

Query: 167 FIPYAALPIGMALLTFRFLQIAWQII 192
            IPYA +  GM LL    LQIA QI+
Sbjct: 152 AIPYALMAAGMTLLC---LQIAVQIV 174