Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, small permease component (from data) from Phaeobacter inhibens DSM 17395

 Score =  201 bits (512), Expect = 7e-57
 Identities = 94/211 (44%), Positives = 139/211 (65%), Gaps = 18/211 (8%)

Query: 26  DSIEEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLVGASFGVKRHF 85
           +++EE LIA  +G MTL+TFANV+ R++FN NILWALE TVF+FAW+VL+GAS+ VK H 
Sbjct: 13  NTLEETLIALLLGLMTLITFANVVARFVFNSNILWALELTVFLFAWLVLLGASYAVKVHA 72

Query: 86  HIGVDVLINIAPARLRKLYALVAVACCLAFSILLLIGSWNYWHPF--------------- 130
           H+GVD ++N+     R++  L++V CCL FS+LLL G+++YW  F               
Sbjct: 73  HLGVDAILNMVSPGARRVIGLISVGCCLVFSLLLLKGAYDYWAVFADLPPTSGRWFPTGF 132

Query: 131 ---ITERAWYETDDIPMPDMLQFLADWVNEGERYEKLPRFIPYAALPIGMALLTFRFLQI 187
                 +++YE  D+PM  +  FL D +N G+ YEKLP+ +PY  LP+ M L+  RF Q 
Sbjct: 133 DMKARSQSFYEVQDVPMVAIFGFLEDLINYGDSYEKLPKVVPYVVLPLSMLLMLLRFAQA 192

Query: 188 AWQIITGKLDRMIAGHEAEEDLEALKAELSE 218
           A QI+ G +DR++A HE E+++  ++A+  E
Sbjct: 193 AMQILRGDVDRLVASHEVEDEIAEVQAQRGE 223