Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Dechlorosoma suillum PS

 Score = 87.0 bits (214), Expect = 3e-22
 Identities = 65/214 (30%), Positives = 103/214 (48%), Gaps = 30/214 (14%)

Query: 21  VGQFTDSIEEFLIAFFMGAMTLLTFANVIMRYL------------FNDNILWALEGTVFM 68
           + +  + +EE +I F MGA T++ F +V+ RYL             + N  WA E  + M
Sbjct: 1   MNKLLNHLEEAIITFLMGAATVIIFLSVVHRYLSGYDIPGLQDWLLSLNFSWAQELCIIM 60

Query: 69  FAWMVLVGASFGVKRHFHIGVDVLINIAPARLRKLYALVAVACCLAFS-ILLLIGSWNYW 127
           F WM   GA++GV+   H+GVDV+IN      R  + L  +     F+ I+  +G+   W
Sbjct: 61  FVWMAKFGAAYGVRTGIHVGVDVVINRLKTANRAKFVLFGLLAGATFTGIVGTLGATFVW 120

Query: 128 HPFITERAWYETDDIPMPDMLQFLADWVNEGERYEKL--PRFIPYAALPIGMALLTFRFL 185
                   ++    I  PD+         EG     L  P ++ Y+A+P+G  L+ FRFL
Sbjct: 121 ENG-AHYQFFHWFGIEAPDLF--------EGPITPDLEWPTWVVYSAVPLGSYLMCFRFL 171

Query: 186 QIAWQII-TGKLDRMIAGHEAEEDLEALKAELSE 218
           Q+A   + TG+L     GH     +E L+ EL++
Sbjct: 172 QVAVSFLKTGELPHHDHGH-----VEGLEEELAQ 200