Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., C4-dicarboxylate transporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 97.8 bits (242), Expect = 1e-25
 Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 4/188 (2%)

Query: 29  EEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLVGASFGVKRHFHIG 88
           EE ++   +  MTLL F  V+ R+ F+   LW  E T+ +  W VL G S+GVK   HIG
Sbjct: 10  EEGVLNLLITLMTLLVFTEVVARFFFDTGFLWIQELTLTLCGWFVLFGMSYGVKVGAHIG 69

Query: 89  VDVLINIAPARLRKLYALVAVACCLAFSILLLIGSWNYWHPFITERAWYETDDIPMPDML 148
           VD L+   P   +K+ +L+    CL + IL L GSW+Y           E    P   + 
Sbjct: 70  VDALVKKLPPNAKKITSLITTLICLTYCILFLKGSWSYLSQMYQIGVPMEDIHFPAWLLA 129

Query: 149 QFLADWVNEGERYE----KLPRFIPYAALPIGMALLTFRFLQIAWQIITGKLDRMIAGHE 204
           +   DW     + +     +P +I  + L IG ++LT+RF+++   I+  ++  +    E
Sbjct: 130 RLDPDWAWNVLKIDIEDGAVPIWISQSILLIGFSMLTWRFIELFVAILRNQVTGLSFADE 189

Query: 205 AEEDLEAL 212
           A+E +  +
Sbjct: 190 AKESMHLI 197