Pairwise Alignments

Query, 232 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 214 a.a., tripartite ATP-independent periplasmic transporter DctQ (RefSeq) from Shewanella sp. ANA-3

 Score = 98.6 bits (244), Expect = 8e-26
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 12/209 (5%)

Query: 29  EEFLIAFFMGAMTLLTFANVIMRYLFNDNILWALEGTVFMFAWMVLVGASFGVKRHFHIG 88
           EE ++   +  MTLL F  V+ R+ FN   LW  E T+ +  W VL G S+GVK   HIG
Sbjct: 10  EEGVLNLLITLMTLLVFTEVVARFFFNTGFLWIQELTLTLCGWFVLFGMSYGVKVGAHIG 69

Query: 89  VDVLINIAPARLRKLYALVAVACCLAFSILLLIGSWNYWHPFITERAWYETDDIPMPDML 148
           VD  +   P + +K+ +LV    CLA+  L L GSW Y       +     +DI  P  L
Sbjct: 70  VDAFVKNLPPKAKKITSLVTALICLAYCGLFLKGSWEYLSQMY--QIGVPMEDIHFPKFL 127

Query: 149 ------QFLADWVNEGERYEKLPRFIPYAALPIGMALLTFRFLQIAWQIITGKLDRMIAG 202
                  F  + +        +P ++  + L IG ++LT+RFL++   I+  ++      
Sbjct: 128 LNSLDPDFAWNTLKIDVEDGAVPIWLSQSILLIGFSMLTWRFLELFIAILRNQVSGFQFA 187

Query: 203 HEAEEDLEALKAELSEAGEAMMPKTQGKE 231
            EA+E +      + EA +    +T  KE
Sbjct: 188 DEAKESMHL----IDEAAQHAQQETDNKE 212