Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., TRAP-type C4-dicarboxylate transport system, large permease component from Pseudomonas fluorescens FW300-N2E2

 Score =  303 bits (777), Expect = 5e-87
 Identities = 158/436 (36%), Positives = 266/436 (61%), Gaps = 24/436 (5%)

Query: 13  MMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFILASTFMST 72
           ++++G+P+A +LG ++++   W      A + Q         ++LLAIPFF+LA   M+ 
Sbjct: 13  LILIGMPVAYALGAAALIGAWWIDIPFQAMMIQV--TGGVNKFSLLAIPFFVLAGAIMAE 70

Query: 73  GGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVIAGMVKNGY 132
           GG+++R++ FA  +VG+ RGGL++ ++VA   F A+SGSS A   ++GS++I  M + GY
Sbjct: 71  GGMSRRLVAFASVLVGFVRGGLSLVNLVASSFFGAISGSSVADTASVGSVLIPEMTRRGY 130

Query: 133 SKEFAAGVICNAGTLGILIPPSIVMVVYSAATN--VSVGRMFLGGVVPGLLAGLMLIIAI 190
            +++A  V  +     +L PPS   V+YS A    VS+G +F+ G+VPG++  L L+   
Sbjct: 131 PRDYATAVTVSGSVQALLTPPSHNAVLYSLAAGGTVSIGSLFMAGIVPGIMMNLCLMALC 190

Query: 191 YITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTEAAAVAAVYSF 250
            + A+ +N PK   +  K+ALK  +EA WG++ + IILGGI  G+FT TE+AA+A V++F
Sbjct: 191 LVFAKKRNYPKGEVIPLKQALKICREAMWGMMTLFIILGGILSGVFTATESAAIAVVWAF 250

Query: 251 FIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFIIANALILK 310
           F+   IYRD      K +  P L+       H+  +           ++M +I  A    
Sbjct: 251 FVTMCIYRDY-----KWSELPKLM-------HRTVRTIS--------IVMILIGFAASFG 290

Query: 311 HVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVAPLVFPIAIA 370
           +++T   IP  IT + L+        L+ +N++LL+ G  M+ + L++I+ P++ P+ + 
Sbjct: 291 YIMTLMEIPAKITTAFLTLSDNRYVILMCINVMLLLLGTVMDMAPLILILTPILMPVIVG 350

Query: 371 LGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVGVMFLFLII 430
           +G+DP+  G++M+VN+ IG+ITPPVG  LFV S + K+S+ + VKA LP+  ++F+ L++
Sbjct: 351 IGVDPVQFGMIMLVNLGIGLITPPVGAVLFVGSAIGKVSIESTVKALLPFYAMLFVVLML 410

Query: 431 VTYVPWVSTWLPTLLM 446
           VTYVP +S WLP L++
Sbjct: 411 VTYVPAISLWLPHLVL 426