Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., TRAP dicarboxylate transporter, DctM subunit from Pseudomonas syringae pv. syringae B728a

 Score =  315 bits (806), Expect = 2e-90
 Identities = 167/448 (37%), Positives = 277/448 (61%), Gaps = 33/448 (7%)

Query: 7   FILV---IGMMIVGVPIAISLGLSSILFLLW---HSDASLASVAQTLFNAFAGHYTLLAI 60
           FIL+   I ++++G+P+A +LGLS+++   W    +DA +  +A  +       ++LLAI
Sbjct: 4   FILLGSFIALILIGMPVAYALGLSALIGAWWIDIPADALMIQIAGGV-----NKFSLLAI 58

Query: 61  PFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIG 120
           PFF+LA   M+ GG+++R++ FA  +VG+ RGGL++ ++VA   F A+SGSS A   ++G
Sbjct: 59  PFFVLAGAIMAEGGMSRRLVAFAAVLVGFVRGGLSLVNIVASTFFGAISGSSVADTASVG 118

Query: 121 SIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATN--VSVGRMFLGGVVP 178
           S++I  M +NGY ++F+  V  +     +L PPS   V+YS A    VS+  +F+ G++P
Sbjct: 119 SVLIPEMERNGYPRDFSTAVTVSGSVQALLTPPSHNSVLYSLAAGGTVSIASLFMAGILP 178

Query: 179 GLLAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTP 238
           GLL   +++    I AR +N PK   V  ++ALK A EA WG++ +VIILGGI  GIFT 
Sbjct: 179 GLLLSAVMMGLCMIFARKRNYPKGEVVPLRQALKIAGEALWGMMAMVIILGGILSGIFTA 238

Query: 239 TEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIM 298
           TE+AA+A +++FF+  FIYRD                    +  +D    ++ A +   +
Sbjct: 239 TESAAIAVLWAFFVTMFIYRD--------------------YKWRDLPKLMHRAARTISI 278

Query: 299 LMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLV 358
           +M +I  A    ++LT   IP  IT + L+        L+ +N++LL+ G  M+ + L++
Sbjct: 279 VMILIGFAASFGYILTLMEIPMKITTAFLTLSDNRYVILMCINVMLLLLGTVMDMAPLIL 338

Query: 359 IVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAAL 418
           I+ P++ P+ + +GIDP+H G++M+VN+ IG+ITPPVG  LFV + V K+++   VKA +
Sbjct: 339 ILTPILLPVIVGVGIDPVHFGMIMLVNLGIGLITPPVGAVLFVGAAVGKVTIEATVKALV 398

Query: 419 PWVGVMFLFLIIVTYVPWVSTWLPTLLM 446
           P+   +FL L++VTY+P +S WLP++++
Sbjct: 399 PFYVALFLVLMLVTYIPAISLWLPSVVL 426