Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., C4-dicarboxylate transport system, permease large protein transmembrane from Sinorhizobium meliloti 1021

 Score =  274 bits (700), Expect = 5e-78
 Identities = 159/440 (36%), Positives = 252/440 (57%), Gaps = 23/440 (5%)

Query: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAI 60
           +A+ +LF + I ++++  PIAI+L LSS+ +LL      L  VAQ +  A    +TLLAI
Sbjct: 3   LALLVLFAVFILLLLIDAPIAIALALSSVAYLLVGDVLPLMVVAQRMV-AGIDSFTLLAI 61

Query: 61  PFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIG 120
           P F+LA   M  GG+A RI+    A+VG   GGLAI  + ACMMF +LSGS  A VVAIG
Sbjct: 62  PLFLLAGLLMVHGGLAPRIVNLCAAVVGQRTGGLAIVMIAACMMFGSLSGSGVADVVAIG 121

Query: 121 SIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGL 180
           S+++  M + GY   F+A  +  AG+LG +IPPSIV++VY  AT  S+G++F+  + PG+
Sbjct: 122 SMLLPAMKERGYHPGFSAAGLGCAGSLGTVIPPSIVLIVYGTATGTSIGQLFIHSIGPGI 181

Query: 181 LAGL-MLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPT 239
           L G  ++++A +I+ +      +PF  W     A +E+   LL  VII+GGI  GIFTPT
Sbjct: 182 LLGFGLMVVAWWISRKNGWKGGEPF-SWTRLGTALRESVLALLAPVIIVGGIRFGIFTPT 240

Query: 240 EAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIML 299
           EAA +   Y+  +   IYR +            L KV          + L D  ++T  +
Sbjct: 241 EAAGIGVAYALLVGALIYRQL-----------TLAKVF---------SLLRDTTEMTGSI 280

Query: 300 MFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVI 359
           + +IA A +   +LT E++PQ++  ++  A       L+++ + +LV G FME   +++I
Sbjct: 281 LIVIAAASVFGWILTVEQVPQLVVNAITGATESATVALMLMMVAVLVLGTFMESIAIILI 340

Query: 360 VAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALP 419
           +AP+  P+     IDP++ G+++ +N+ IG  TPP+G++L        + M    +  LP
Sbjct: 341 LAPVFLPVLRVFEIDPVYFGVLLTINLAIGANTPPLGIDLMAACRTGGIPMSASFRYLLP 400

Query: 420 WVGVMFLFLIIVTYVPWVST 439
           ++GVM L + ++   P + T
Sbjct: 401 FIGVMALIMFLLVLFPGLMT 420