Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., large C4-dicarboxylate uptake permease, DedA family protein from Sinorhizobium meliloti 1021

 Score =  231 bits (590), Expect = 3e-65
 Identities = 138/444 (31%), Positives = 233/444 (52%), Gaps = 26/444 (5%)

Query: 8   ILVIGMMIVGVPIAISLGLSSILFLLWHSDA-SLASVAQTLFNAFAGHYTLLAIPFFILA 66
           +LV+ + ++  PI  ++ + +  F L + D   LA+ AQ +    +   +LLA+P F+LA
Sbjct: 11  LLVVVLFLLSTPITWAMAIGAFAFFLINMDMIPLANFAQEMAEG-SQSVSLLALPLFVLA 69

Query: 67  STFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVIAG 126
              M+  G+ +R++  A  +VG   G LA    V   +   L+ S+ A    +   +   
Sbjct: 70  GCIMNASGITRRLLALADVLVGHMTGALAQMCTVLGTLLGGLTASANADAAMLAKTLGVE 129

Query: 127 MVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLAGLML 186
           M + GYS+ FAA +  +A  +  LIPPSI ++VY      S+GR+F  GV+PGL+    L
Sbjct: 130 MSQRGYSRAFAAVITSSAAIITSLIPPSIGLIVYGFLAETSIGRLFAAGVIPGLVLATGL 189

Query: 187 IIAIYITAR---IKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTEAAA 243
           ++  Y  AR    K L K+      E ++A  +  W L + V+I  G   G+FT TEA A
Sbjct: 190 MVTTYFIARKRGYKPLRKERATR-AEGVRALIDGLWALSIPVVIFAGTRYGLFTTTEAGA 248

Query: 244 VAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFII 303
           V  VY  F+A F YR+                    F  +     L +A + + ++M +I
Sbjct: 249 VVVVYVLFVAVFGYRE--------------------FTFRQIPEVLAEAVRDSAVVMIMI 288

Query: 304 ANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVAPL 363
             A      L  E++PQ ++  +  A   P+  L+++N++L+V G  +E S  L+I+ P+
Sbjct: 289 CAAAAFGFYLAWEQVPQAMSGWLGEATDNPLLMLLLINVLLIVIGTAIEGSAALIILTPM 348

Query: 364 VFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVGV 423
           + PI   +GID +H G++ + N+ I  ITPPVG  ++++S V K+ MM   +  LP++ +
Sbjct: 349 LIPIIDGVGIDRVHFGVVFITNLTIAGITPPVGGLMYISSMVLKVPMMAYAREVLPYLAM 408

Query: 424 MFLFLIIVTYVPWVSTWLPTLLMG 447
           M + L++++  P +S WLP L+ G
Sbjct: 409 MMVILVMLSMFPQLSLWLPNLVYG 432