Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., TRAP transporter, subunit DctM from Phaeobacter inhibens DSM 17395

 Score =  216 bits (551), Expect = 9e-61
 Identities = 129/438 (29%), Positives = 226/438 (51%), Gaps = 26/438 (5%)

Query: 8   ILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFILAS 67
           IL + ++ + VP+  ++G ++I  L+   D  L+++ ++LF      + L A+P FIL  
Sbjct: 21  ILFVALIALAVPVWAAIGAAAITMLVMSGDLPLSAIGESLFTGIDA-FALTAVPLFILTG 79

Query: 68  TFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVIAGM 127
             +   G++K+ +  A A+  W RGG   A+V+ C MFAA+SGS  A   A+G + IA +
Sbjct: 80  DVLVRTGLSKKFLDVAEALTCWTRGGFGSATVLVCGMFAAISGSDAAGAAAVGRMTIARL 139

Query: 128 VKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLAGLMLI 187
           V++GY + +A  ++      GILIPPSI  ++      +S   +FL  ++PG+   + ++
Sbjct: 140 VESGYPRPYACALVAAGACTGILIPPSIAYIIIGLVLGISASTLFLAALIPGIAILVSIL 199

Query: 188 IAIYITARIKNLPKQPFVG---WKEALKAAKEASWGLLLVV-IILGGIYGGIFTPTEAAA 243
           +   I  R+        +G   W   L  + ++ W   +V  II  GI+ G  TPTEA A
Sbjct: 200 VTNIIMNRLYTYETGGNMGLGEWLGNLGQSLKSGWYAFIVPGIIFYGIFSGRLTPTEAGA 259

Query: 244 VAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFII 303
            A V +  +                       ++ T    D  A L  + K+  +++ II
Sbjct: 260 TAVVVTILMG---------------------FLLGTLKLADFPAMLVSSAKVNGVILPII 298

Query: 304 ANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVAPL 363
           A +  L   L    +PQ    ++      P   ++++  IL+  G  ME +  +VI+AP+
Sbjct: 299 AFSAPLAEALAIMGVPQGFVTAVTGLTDDPSILILLMICILIAAGCVMETTPNIVILAPI 358

Query: 364 VFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVGV 423
           + P+A  +G++ I   IMM+  + +G ITPP+GLNLFV SG+   S++ +   A+P+V  
Sbjct: 359 LKPLADNIGMNEIQFCIMMITALGVGFITPPLGLNLFVVSGITGESILKIAARAIPFVLT 418

Query: 424 MFLFLIIVTYVPWVSTWL 441
           M + ++++ Y+P +ST L
Sbjct: 419 MLIVVLLIAYLPAISTTL 436