Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score =  437 bits (1124), Expect = e-127
 Identities = 220/445 (49%), Positives = 305/445 (68%), Gaps = 21/445 (4%)

Query: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAI 60
           M  A++F L++ +M+ G+PI+ISLGL+ + FL   +   + SVA  LF      + ++AI
Sbjct: 1   MNAAIIFGLLLALMLTGMPISISLGLTVLTFLFTMTQVPIESVALKLFTGIE-KFEIMAI 59

Query: 61  PFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIG 120
           PFFILA  F++ GGVA+R+I FA AMVG F GGL +A V+AC +FAA+SGSSPATVVAIG
Sbjct: 60  PFFILAGNFLTHGGVARRMINFASAMVGHFYGGLGLAGVLACALFAAVSGSSPATVVAIG 119

Query: 121 SIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGL 180
           SI++  MV+ G+   F AGVI  +G LGILIPPSIVMV+YS ATN SVG +F+ GV+PGL
Sbjct: 120 SILLPAMVRAGFPNRFGAGVITTSGALGILIPPSIVMVMYSVATNTSVGALFMAGVIPGL 179

Query: 181 LAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTE 240
           L    L +  +  A+  + P+ P   W E   A +++ WGL+L+VI++GGIY G+FTPTE
Sbjct: 180 LLAFTLGMVTWYRAKKFDYPRMPKASWGERWVAFRKSVWGLMLIVIVMGGIYTGMFTPTE 239

Query: 241 AAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLM 300
           AAA++AVY+F +A F+Y+DMG                     K     L D+  ++ ML+
Sbjct: 240 AAAMSAVYAFIVAVFVYKDMG--------------------LKQIPKVLLDSANMSAMLL 279

Query: 301 FIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIV 360
           +II NA++   ++T E IPQ++ E +L  GLGPI FL+ VN++LLV G FMEPS +++I+
Sbjct: 280 YIITNAVLFSFLMTNENIPQLLAEWLLDKGLGPIAFLLAVNVLLLVAGNFMEPSSIVLIM 339

Query: 361 APLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPW 420
           AP++FP+A+ LGIDP+H GI++VVNME+GM  PPVGLNL+V SG+ KM +  +  A  PW
Sbjct: 340 APILFPVAVKLGIDPVHFGILIVVNMEVGMCHPPVGLNLYVASGITKMGITELTIAVWPW 399

Query: 421 VGVMFLFLIIVTYVPWVSTWLPTLL 445
           +  M  FL +VTY P +S WLP  L
Sbjct: 400 LLSMLCFLGLVTYWPTLSLWLPRTL 424