Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., TRAP transporter, DctM subunit from Dechlorosoma suillum PS

 Score =  269 bits (688), Expect = 1e-76
 Identities = 161/447 (36%), Positives = 249/447 (55%), Gaps = 30/447 (6%)

Query: 5   LLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFI 64
           LLF+    +M++GVP+  ++GL+  L +++  D  L S+  +++   A  Y LLAIP F+
Sbjct: 4   LLFLSFFALMLLGVPLGTAMGLAG-LAVVFFGDLGLMSLPTSVYTGIA-KYPLLAIPVFV 61

Query: 65  LASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVI 124
           LA       GVA R++RFA+A+VG  RGGLA+A+++ CM+   +SGS PA   A+ +++I
Sbjct: 62  LAGMIFERSGVALRLVRFAVALVGQRRGGLALAAILVCMVLGGISGSGPADAAAVATVMI 121

Query: 125 AGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSA-ATNVSVGRMFLGGVVPGLLAG 183
             M + GY   F+A VI  AG+  ILIPPSIV ++YS      SV  +F  G++PGLLAG
Sbjct: 122 PSMARAGYPAAFSASVIAAAGSTAILIPPSIVFILYSVLVPQASVPALFAAGLIPGLLAG 181

Query: 184 LMLII-AIYITAR----IKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTP 238
           L L++ A +++ R    +  L  Q     +    A KEASWGLL  VIILGG+  G FTP
Sbjct: 182 LALMLPAWWLSVRHGFGVAGL--QDGEARQSFWSALKEASWGLLAPVIILGGMRSGAFTP 239

Query: 239 TEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIM 298
           TEAA VA  Y  F+   IYR                    T   K+    L ++ +++ +
Sbjct: 240 TEAAVVAVFYGLFVGLVIYR--------------------TLNWKNIYEVLVESAEVSAV 279

Query: 299 LMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLV 358
           +M IIA A +     +     + +   ++         L+ V L+LL+ G F++   +L 
Sbjct: 280 VMLIIALASVFAWAGSTLGTFEALGGWLVGLSGNETAILLAVTLLLLIAGMFLDAVSILF 339

Query: 359 IVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAAL 418
           I  P + P+ +  G DP+  G+++ +N+ IG  TPP+ +NL VTS +A + + + V   L
Sbjct: 340 IFMPFLLPVILHFGWDPVWFGVILTMNVAIGQFTPPMAINLMVTSRIAGIRIEDTVPWVL 399

Query: 419 PWVGVMFLFLIIVTYVPWVSTWLPTLL 445
             VG M   L++VT+VP ++T +P  L
Sbjct: 400 WMVGAMLSALLLVTFVPELATGIPRYL 426