Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., TRAP transporter large permease from Pantoea sp. MT58

 Score =  319 bits (817), Expect = 1e-91
 Identities = 174/447 (38%), Positives = 272/447 (60%), Gaps = 24/447 (5%)

Query: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAI 60
           M   +L   ++ +++VG P+A ++GLS+ +   W  D  L +V   + N     ++LL I
Sbjct: 1   MDALILIGSLLVLLLVGFPVAFAVGLSAFIGAWW-IDLPLEAVVIQITNGI-NKFSLLTI 58

Query: 61  PFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIG 120
           PFFILA   M+ GG+A+R++ FA   VG+ RGGL++ ++VA   F A+SGSS A   +IG
Sbjct: 59  PFFILAGAIMAEGGIARRLVNFAYIFVGFIRGGLSLVNIVASTFFGAISGSSVADTASIG 118

Query: 121 SIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATN--VSVGRMFLGGVVP 178
           S++I  M + GY ++FAA V  +     +L PPS   V+YS AT   V++  +F+ G++P
Sbjct: 119 SVMIPQMEEKGYPRDFAAAVTASGSVQAVLTPPSHNSVIYSLATGGMVTISSLFVAGILP 178

Query: 179 GLLAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTP 238
           GL+ G  L++     AR +  PK   + +++ALK   +A WGL  VVII+GGI  GIFT 
Sbjct: 179 GLMLGGCLMVMCLGFARKRGYPKGERIPFRQALKIFFDAFWGLFTVVIIMGGILSGIFTA 238

Query: 239 TEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIM 298
           +E+AA+A +++FF+  FIYRD      K N   +L               L+   K   +
Sbjct: 239 SESAAIACIWAFFVTMFIYRDF-----KWNQLHIL---------------LFRTIKTVTI 278

Query: 299 LMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLV 358
           +M +IA A     V+T  ++P MITE+  S        L+ +N++LLV G  M+ + L++
Sbjct: 279 VMVLIAFAAGFGAVMTFMQLPTMITEAFTSLSDNKYVILMCINILLLVVGTLMDMAPLIL 338

Query: 359 IVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAAL 418
           I+ P++ P+A +LGIDP+H G++M+ N+ IG+ITPPVG  LFV S V+K  +  VV A L
Sbjct: 339 ILTPVLLPVATSLGIDPVHFGMIMLTNLGIGLITPPVGTVLFVASAVSKQKIEQVVGAML 398

Query: 419 PWVGVMFLFLIIVTYVPWVSTWLPTLL 445
           P+ G++F+ L+++TY+P +S WLP L+
Sbjct: 399 PFYGMLFIVLMLITYIPAISLWLPRLM 425