Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., C4-dicarboxylate TRAP transporter large permease protein DctM from Enterobacter sp. TBS_079

 Score =  322 bits (826), Expect = 1e-92
 Identities = 183/447 (40%), Positives = 273/447 (61%), Gaps = 27/447 (6%)

Query: 2   AVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIP 61
           A  LLF L I ++ +G+P+A ++GLS++   LW      A + Q    +    +TLLAIP
Sbjct: 3   AFVLLFTLAI-LLALGMPVAFAVGLSAVAGALWIDLPLEALMIQ--ITSGVNKFTLLAIP 59

Query: 62  FFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGS 121
           FFILA   M+ GG+A+R++ FA   VG+ RGGL++ ++VA   F A+SGSS A   +IGS
Sbjct: 60  FFILAGAIMAEGGIARRLVNFAYVFVGFIRGGLSLVNIVASTFFGAISGSSVADTASIGS 119

Query: 122 IVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATN--VSVGRMFLGGVVPG 179
           ++I  M K GY +++AA V  +     ILIPPS   V+YS A    VS+  +F+ GV+PG
Sbjct: 120 VMIPEMEKKGYPRDYAAAVTASGSVQAILIPPSHNSVIYSLAAGGTVSIATLFIAGVLPG 179

Query: 180 LLAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPT 239
           LL G+ L+      AR +  PK   + +K+ALK   +A WGL+ VVIILGGI  GIFT T
Sbjct: 180 LLLGVSLMAMCLGFARKRGYPKGEKIPFKQALKITLDALWGLMTVVIILGGILSGIFTAT 239

Query: 240 EAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLV-KVVETFVHKDTKATLYDAGKLTIM 298
           E+AAVA +++FF+  FIYRD      K N  P L+ + V+T                  +
Sbjct: 240 ESAAVACLWAFFVTMFIYRDY-----KWNELPKLMCRTVKTVT----------------I 278

Query: 299 LMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLV 358
           +M +I  A     V+T  ++P  ITE   S        L+ +N++LL+ G  M+ + +++
Sbjct: 279 VMILIGFAAAFGAVMTYMQLPSRITEFFTSLSDNKYVILMYLNIMLLLIGTLMDMAPIIL 338

Query: 359 IVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAAL 418
           I+ P++ P+  +LGIDP+H G++M+VN+ IG+ITPPVG  LFV S V+K  + +VV+A L
Sbjct: 339 ILTPVLLPVTNSLGIDPVHFGMIMMVNLGIGLITPPVGSVLFVASAVSKQKIEHVVRAML 398

Query: 419 PWVGVMFLFLIIVTYVPWVSTWLPTLL 445
           P+ G++ + L +VTY+P +S WLP +L
Sbjct: 399 PFYGMLLVVLAMVTYIPAISLWLPRVL 425