Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., TRAP dicarboxylate transporter family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  326 bits (836), Expect = 1e-93
 Identities = 172/437 (39%), Positives = 268/437 (61%), Gaps = 38/437 (8%)

Query: 14  MIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFILASTFMSTG 73
           + VGVPIAI LGL+++  ++      +  +AQ  F +    + ++AIPFFI A  FM  G
Sbjct: 182 LAVGVPIAIGLGLAALATIIAAGTLPIEYIAQVAFTSIDS-FPIMAIPFFIAAGVFMGAG 240

Query: 74  GVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVIAGMVKNGYS 133
           G+++R++  A  M+G   GG+A+A++  CM FAA+SGS PATV AIGS+ I  MV+ GY 
Sbjct: 241 GLSRRLLTLADEMLGSLHGGMALATIGTCMFFAAISGSGPATVAAIGSLTIPAMVERGYD 300

Query: 134 KEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLAGLMLIIAIYIT 193
           K F+A V+  AG +G++IPPS   VVY  +  VS+G++FLGG+VPG+L GL L++  Y  
Sbjct: 301 KYFSAAVVAAAGAIGVMIPPSNPFVVYGVSAQVSIGKLFLGGIVPGVLTGLALMVYSYWY 360

Query: 194 ARIKNLPKQPFVGWKEAL---------KAAKEASWGLLLVVIILGGIYGGIFTPTEAAAV 244
           ++ +        GWK  +         +A  +A W L++ VI+LGGIYGGI TPTEAAA+
Sbjct: 361 SKKR--------GWKGEVRVRNLRTFTRALWDAKWALMVPVIVLGGIYGGIMTPTEAAAL 412

Query: 245 AAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFIIA 304
           AA Y  F+  FI+R++       N   +   +VE             A   + +++ ++A
Sbjct: 413 AAFYGLFVGCFIHREL-------NCGSLYDCIVE-------------AAGTSAVVIVLMA 452

Query: 305 NALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVAPLV 364
            A I  +++T E +P  I  +ML+     I  L+++N++L+V G FME    +VI+ P++
Sbjct: 453 MATIFGNIMTIEEVPTAIATAMLNLTENKIAILMLINVLLIVIGTFMEALAAIVILTPIL 512

Query: 365 FPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVGVM 424
            PI + +G+DP+H G++MVVN+ IG + PPVG+NLFV SGVA   + ++ K  +P + +M
Sbjct: 513 LPIVLKVGVDPVHFGVIMVVNLAIGFVPPPVGVNLFVASGVAHAKIEHLSKVVMPLIAIM 572

Query: 425 FLFLIIVTYVPWVSTWL 441
              L+++TYVP +  +L
Sbjct: 573 IGVLLLITYVPALPMFL 589