Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  216 bits (550), Expect = 1e-60
 Identities = 135/446 (30%), Positives = 225/446 (50%), Gaps = 42/446 (9%)

Query: 8   ILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFILAS 67
           I+ + ++ + VP+  ++G S+IL L+W     L+ V + LF+     + L A+P FIL  
Sbjct: 21  IMFVALVALAVPVWAAIGASAILMLVWSGALPLSLVGERLFSGIDA-FALTAVPLFILTG 79

Query: 68  TFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVIAGM 127
             +   G++++ +  A A+  + +GG   A+V+ C MFAA+SGS  A   A+G + IA +
Sbjct: 80  DALVRTGLSRKFLDVAEALTQFAKGGFGSATVLVCGMFAAISGSDAAGAAAVGRMTIARL 139

Query: 128 VKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLAGLMLI 187
           V++GY + +A  ++      GILIPPSI  ++      +S   +FL  V+PGL       
Sbjct: 140 VESGYPRPYACALVAAGACTGILIPPSIAYIIIGLVLGISASTLFLAAVIPGL------- 192

Query: 188 IAIYITARIKNLPKQPFVGWK-----------EALKAAKEASWGLLLVV-IILGGIYGGI 235
            AI ++  + N+      GW+             L  A ++ W   +V  II  GI+ G 
Sbjct: 193 -AILVSILVTNIIMNRLNGWEGGGNVSMPEYFSRLWTALKSGWYAFIVPGIIFYGIFSGR 251

Query: 236 FTPTEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKL 295
            TPTEA A A V +                      V+  V+ T    D  A L  + K+
Sbjct: 252 MTPTEAGATAVVVTI---------------------VMGFVLGTLKLSDFPAMLVSSAKV 290

Query: 296 TIMLMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSG 355
             +++ IIA ++ L   L    +PQ            P   ++++  IL+  G  ME + 
Sbjct: 291 NGVILPIIAFSVPLAEALAIIGVPQGFVAVATGVSEEPWVLILMMLAILVAAGCVMETTP 350

Query: 356 LLVIVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVK 415
            +VI+AP++ P+A  +G++ I   IMM+  + +G ITPP+GLNLFV SG+   S++ +  
Sbjct: 351 NIVILAPILLPLAEEIGMNEIQFCIMMITALGVGFITPPLGLNLFVVSGITGESILKIAY 410

Query: 416 AALPWVGVMFLFLIIVTYVPWVSTWL 441
            A+P+V  M L  +++ Y+P +ST L
Sbjct: 411 RAVPFVFFMLLVTLMIAYIPAISTAL 436