Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  266 bits (680), Expect = 1e-75
 Identities = 153/462 (33%), Positives = 254/462 (54%), Gaps = 42/462 (9%)

Query: 3   VALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPF 62
           + +LF   + ++++G PI ++LG+S+++  L+  +  +  V Q  F +  G + L+A+P 
Sbjct: 6   ILILFGGFLTLLLIGAPITVALGVSTLISFLYLGENPIKFV-QIAFTS-VGSFPLMALPA 63

Query: 63  FILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSI 122
           FILA   M   G+++R+I  A +  G F GG++ A+V AC+ F A+SGS PAT  A+G +
Sbjct: 64  FILAGALMEASGLSRRLINVAESFAGPFTGGMSAATVFACLFFGAISGSGPATTAAVGML 123

Query: 123 VIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAAT-----------------N 165
           +I  M++ GY + +++ +  ++G LGI+IPPSI ++++  A                   
Sbjct: 124 MIPAMIQRGYGRSYSSAITASSGGLGIVIPPSIPLIIFGIAALGMPAPPEAVEKFGTFQT 183

Query: 166 VSVGRMFLGGVVPGLLAGLMLIIAIYITARIKNLPKQPFVGW--KEALKAAKEASWGLLL 223
           VS+ ++F+ G +P  L    L++  YI A+ K+  K    GW  ++         W L+ 
Sbjct: 184 VSIPKLFIAGFMPAFLIAGSLLLMNYILAK-KHGYKGSAEGWSARQIWCELYRGFWALMA 242

Query: 224 VVIILGGIYGGIFTPTEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHK 283
            ++ILGGIY G FTPTEAA VA  Y+  +   IYR++        +   L   +ET    
Sbjct: 243 PLVILGGIYSGFFTPTEAAIVAIFYTLVVGTVIYREL--------SWQKLFTALETTTW- 293

Query: 284 DTKATLYDAGKLTIMLMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLI 343
                      LT  ++ I+  A +   +L E +IP +I   MLS          +V L 
Sbjct: 294 -----------LTGRVLLIMFTATVFGRLLVENQIPAVIANGMLSITDNIYIIWTLVILF 342

Query: 344 LLVGGQFMEPSGLLVIVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTS 403
           LL  G FME    ++I+ P++ P+A ++GIDPIH G++MV  + IG  TPP+G NLF+ S
Sbjct: 343 LLFVGMFMETLATILILVPVMLPVAYSVGIDPIHFGVVMVCCLGIGFQTPPLGENLFIAS 402

Query: 404 GVAKMSMMNVVKAALPWVGVMFLFLIIVTYVPWVSTWLPTLL 445
           G++ +S+  +  AALP+  +  + + I+ +VP ++ WLP LL
Sbjct: 403 GISNISIERISVAALPFAFINTVAIFIIAFVPEITLWLPRLL 444