Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., TRAP dicarboxylate transporter, DctM subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  272 bits (695), Expect = 2e-77
 Identities = 145/444 (32%), Positives = 252/444 (56%), Gaps = 25/444 (5%)

Query: 5   LLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQTLFNAFAGHYTLLAIPFFI 64
           ++ IL++ ++I G+PIA  LG+++ + +L    A +  +   +    A +Y L+A   F+
Sbjct: 8   IILILLVVLLIAGLPIAFVLGVTAAVMILL-DPAVVPQIIGLIPFGGANNYLLVAALLFM 66

Query: 65  LASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVAIGSIVI 124
           +A   M+ G +A+++I FA ++VG  RGGLA  +++  + F+ +SG++ +   AIGS++I
Sbjct: 67  IAGEIMNQGKIAEKLIAFASSLVGHIRGGLAHVNILTSLFFSEISGTATSDAAAIGSVMI 126

Query: 125 AGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAATNVSVGRMFLGGVVPGLLAGL 184
             M K GY   FAA V   + T+ I++PPS+ +++Y+   N S+  +F  G+VPG L   
Sbjct: 127 PQMRKRGYPAAFAAAVTSTSATMAIIVPPSLNLILYAYVANASIAELFAAGIVPGFLVCG 186

Query: 185 MLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIFTPTEAAAV 244
           +L+   YI +  +  P +    W    +  K+A+  L L +++L GI GGIFT TEA A+
Sbjct: 187 LLMGTAYIISVKRGYPTEGAFSWGRVAETGKDAAIPLTLPILVLAGILGGIFTATEAGAI 246

Query: 245 AAVYSFFIANFIYR--DMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLTIMLMFI 302
           AA +S  +A FIYR   +G   D                      TL  AGK + MLMFI
Sbjct: 247 AAFWSIVLAAFIYRTVKLGTLID----------------------TLRIAGKRSAMLMFI 284

Query: 303 IANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGLLVIVAP 362
           +A + +L   LT +RIPQ I E +L         L+ +N+  L+ G  +  +  ++++ P
Sbjct: 285 VATSTLLGWYLTNQRIPQDIAEGILGLSDNYWVILLAINVFFLLAGTIIHGTPAILMLVP 344

Query: 363 LVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKAALPWVG 422
           +  P+A  LGID +H G+++ +N+ IG  TPPV   + +T  +AK+S+  ++ + L ++G
Sbjct: 345 IFLPLADQLGIDRVHFGLILTINLGIGQQTPPVASVVLITCAIAKISIAKIIPSMLMFIG 404

Query: 423 VMFLFLIIVTYVPWVSTWLPTLLM 446
            M + L+++   P +S WLP++++
Sbjct: 405 AMLVALLLINLFPALSLWLPSVIL 428