Pairwise Alignments

Query, 453 a.a., C4-dicarboxylate ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., C4-dicarboxylate transporter large subunit from Caulobacter crescentus NA1000

 Score =  296 bits (758), Expect = 9e-85
 Identities = 172/448 (38%), Positives = 259/448 (57%), Gaps = 28/448 (6%)

Query: 1   MAVALLFILVIGMMIVGVPIAISLGLSSILFLLWHSDASLASVAQ--TLFNAFAGHYTLL 58
           M + LL  L+  ++I+GVP+A +LGL+S++  ++   A + +  +  T  N F+    L+
Sbjct: 1   MELTLLLGLLALLLIIGVPVAFALGLASLVTFIFMDIAPVVAFQRIATGVNVFS----LM 56

Query: 59  AIPFFILASTFMSTGGVAKRIIRFAIAMVGWFRGGLAIASVVACMMFAALSGSSPATVVA 118
           AIPFFI A   M   G+A+R++R A A +G  RGGL +  V A MMF  +SGS+ A+V A
Sbjct: 57  AIPFFIFAGDLMQQAGIAERLVRVADAAMGRIRGGLGVVDVGASMMFGGVSGSAVASVSA 116

Query: 119 IGSIVIAGMVKNGYSKEFAAGVICNAGTLGILIPPSIVMVVYSAAT--NVSVGRMFLGGV 176
           +GS +I  M + GY  ++A  V   +  LGILIPPS  M++Y+AA   +VSV  +FL GV
Sbjct: 117 LGSTLIPLMKEKGYDADYAVNVTSTSAILGILIPPSHNMIIYAAAAGVSVSVADLFLAGV 176

Query: 177 VPGLLAGLMLIIAIYITARIKNLPKQPFVGWKEALKAAKEASWGLLLVVIILGGIYGGIF 236
           +PG+L G+ L  A +I A  +  PK  F GW     A   A  GLL  VII GG+ GG+F
Sbjct: 177 LPGILTGIFLAAAAWIIAVRRGYPKGEFPGWPAFAAAFASALPGLLTAVIIFGGVLGGVF 236

Query: 237 TPTEAAAVAAVYSFFIANFIYRDMGPFADKTNTKPVLVKVVETFVHKDTKATLYDAGKLT 296
           TPTE++AVA +Y+  IA  +YR +G                     +       +A K T
Sbjct: 237 TPTESSAVAVIYTLVIAVIVYRTLG--------------------FRGFTTAAQNAVKTT 276

Query: 297 IMLMFIIANALILKHVLTEERIPQMITESMLSAGLGPITFLIVVNLILLVGGQFMEPSGL 356
            M+M II +A     +L     P+ +   + +    PI  L+++NLILL+ G FM+ + L
Sbjct: 277 AMVMLIIGSAAAFGWLLALLEAPEQLATLLQTLTDNPILILLLINLILLILGTFMDMAPL 336

Query: 357 LVIVAPLVFPIAIALGIDPIHLGIMMVVNMEIGMITPPVGLNLFVTSGVAKMSMMNVVKA 416
           +VI +P+  P+A+A G+DP+  GIMM++N+ IG++TPPVG  LFV   V K+ +   V+ 
Sbjct: 337 IVITSPIFLPVAMATGMDPVQFGIMMMLNLGIGLVTPPVGSVLFVGCAVGKIKVEQAVRT 396

Query: 417 ALPWVGVMFLFLIIVTYVPWVSTWLPTL 444
             P+   +F  L+ +T+VP ++  LP L
Sbjct: 397 IWPFYLALFAALMAITFVPALTLTLPGL 424