Pairwise Alignments

Query, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., two-component response regulator protein from Sinorhizobium meliloti 1021

 Score =  410 bits (1054), Expect = e-119
 Identities = 217/440 (49%), Positives = 292/440 (66%), Gaps = 3/440 (0%)

Query: 4   VFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLSGQN 63
           + L+DDE ++R + AQ+ ELA      FAS E AL  I A     V++SDI +PG+ G  
Sbjct: 6   ILLVDDEEELRRSSAQALELAGFRVDTFASAEYALERI-AFSFHGVVISDIRMPGMDGMT 64

Query: 64  LLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEKRRL 123
            L  +   D+ELPVIL+TGHGD+ +AV+AM +GAYDF+EKPF  + L  ++ RA++ R L
Sbjct: 65  FLQRIREIDAELPVILVTGHGDVQLAVRAMREGAYDFVEKPFTAQMLAGSIRRALDWRSL 124

Query: 124 TLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKELVAR 183
            LENR+L+        +  R+ G + A+  LR  I  +  + AD L+ GETG GKE+VAR
Sbjct: 125 VLENRRLRAVAGKRDDIEQRLPGRSQAMVDLRYRIRAIGASDADTLIIGETGVGKEVVAR 184

Query: 184 SLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTLFLD 243
           +LH+ SSR    F+AINC A+PENLIESEL+GHE GAF GA   R GKFEH +GGT+ LD
Sbjct: 185 ALHDLSSRASGPFIAINCAALPENLIESELFGHEPGAFPGALRPRYGKFEHGRGGTILLD 244

Query: 244 EIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQDLYY 303
           EI SMP   Q + LRVLQERVI R+GSNE +PLD+R IA +K+DL++  A  +FR DL Y
Sbjct: 245 EIGSMPFDLQAKFLRVLQERVITRLGSNETVPLDVRFIATSKVDLEREVASSRFRADLLY 304

Query: 304 RLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGNVRE 363
           RLN+ TL +P L +RR DIP LF   +  +AARYG+    ++ +    + + +WPGNVRE
Sbjct: 305 RLNVATLRVPTLSQRRSDIPLLFMQLVRESAARYGRDDIVVSPALASEMAAREWPGNVRE 364

Query: 364 LRNAAERYVLLGKLAQFAESHEPKSKLLGLNEQVAEFEKSLLEQTLIECGGSIKATMERL 423
           LRNAAER V LG   +  E+  P +    L ++VA FEKS++   L   GG++K   E L
Sbjct: 365 LRNAAERLV-LGLEVEREEALAPANG-QRLTDKVAAFEKSVIASALAAHGGALKPVYESL 422

Query: 424 HLPRKTLYDKMQKYQLDKES 443
            + RKTLY+KMQK+ LDK++
Sbjct: 423 GISRKTLYEKMQKFGLDKKA 442