Pairwise Alignments

Query, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., C4-dicarboxylate transport transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  441 bits (1134), Expect = e-128
 Identities = 227/441 (51%), Positives = 306/441 (69%), Gaps = 2/441 (0%)

Query: 4   VFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLSGQN 63
           VFLIDD+ D+R A+ Q+ ELA      FAS  EAL  + A    +VI SDI +PG+ G  
Sbjct: 7   VFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLSADFAGIVI-SDIRMPGMDGLA 65

Query: 64  LLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEKRRL 123
           L   +L  D +LP+IL+TGHGDI MAV+A+ DGAYDFI KPFA +RL+ +  RA EKRRL
Sbjct: 66  LFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEKRRL 125

Query: 124 TLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKELVAR 183
            +ENR L+R+ + +   G  +IG+T  ++ LR T+  +ADT  D+L+ GETG+GKE+VA 
Sbjct: 126 VMENRSLRRAAEAASE-GLPLIGQTPVMERLRQTLKHIADTDVDVLVAGETGSGKEVVAT 184

Query: 184 SLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTLFLD 243
            LH+ S RR  NFVA+NCGA+PE +IESEL+GHE GAFTGA  +R+G+ EHA GGTLFLD
Sbjct: 185 LLHQWSRRRTGNFVALNCGALPETVIESELFGHEPGAFTGAVKKRIGRIEHASGGTLFLD 244

Query: 244 EIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQDLYY 303
           EIE+MP   Q+++LRVL+ R I  +G+N   P+DIRV+AA K+DL   AA G FR+DLYY
Sbjct: 245 EIEAMPPATQVKMLRVLEAREITPLGTNLTRPVDIRVVAAAKVDLGDPAARGDFREDLYY 304

Query: 304 RLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGNVRE 363
           RLN+VTL+IPPLRERR+DIP LF HFL  A+ R+G+   A++A+    L +H WPGNVRE
Sbjct: 305 RLNVVTLSIPPLRERRDDIPLLFSHFLARASERFGREVPAISAAMRAYLATHSWPGNVRE 364

Query: 364 LRNAAERYVLLGKLAQFAESHEPKSKLLGLNEQVAEFEKSLLEQTLIECGGSIKATMERL 423
           L + AER  L  +      +  P S    L E++  +E  +L+Q L    G +K T++ L
Sbjct: 365 LSHFAERVALGVEGNLGVPAAAPASSGATLPERLERYEADILKQALTAHCGDVKETLQAL 424

Query: 424 HLPRKTLYDKMQKYQLDKESY 444
            +PRKT YDK+Q++ +++  Y
Sbjct: 425 GIPRKTFYDKLQRHGINRADY 445