Pairwise Alignments

Query, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Phaeobacter inhibens DSM 17395

 Score =  293 bits (750), Expect = 8e-84
 Identities = 170/452 (37%), Positives = 254/452 (56%), Gaps = 26/452 (5%)

Query: 4   VFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLSGQN 63
           + ++DDE D+R +++Q   L+  + + FAS E+AL  +     P +++SDI +PG+ G  
Sbjct: 7   IAIVDDEQDMRQSISQWLALSGYDTETFASAEDALKVL-GPDYPGIVISDIKMPGMDGMQ 65

Query: 64  LLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEKRRL 123
            L  ++  DS LPVI+ITGHGD+ MAV+AM  GA+DF+EKPF P+R+ +   RA   RRL
Sbjct: 66  FLKKLMGSDSALPVIMITGHGDVPMAVEAMRVGAFDFLEKPFNPDRMSELAKRATGARRL 125

Query: 124 TLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKELVAR 183
           TL+NR L+R L    T+  ++IG +  ++ LR+ I  +      +L+ GETGTGK LVA 
Sbjct: 126 TLDNRVLRRELSDGSTIMKKLIGSSPVMERLREDILDLGQADGHVLIDGETGTGKTLVAH 185

Query: 184 SLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTLFLD 243
           +LH   SR  + FV ++C A+ E  +   L+G         +   +   E A+GGTL L+
Sbjct: 186 ALHAVGSRAGKKFVLVSCAALEEEALSKRLFGPML-----PEDSMLPAIEEARGGTLVLE 240

Query: 244 EIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQDLYY 303
           +I+++    Q +LL V+ E         + IP + R++A + +       E   R DL+Y
Sbjct: 241 DIDALSETLQAKLLSVINE---------QGIPGETRIVAISNLQEAGKTCEDALRPDLFY 291

Query: 304 RLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGNVRE 363
           RL  + +T+PPLR+R EDI  LF       +  YG  A  ++A +   LL   WPGNVR+
Sbjct: 292 RLAALRITVPPLRQRGEDILTLFTRLSEQFSEEYGCDAPQVSAQEAAQLLQAPWPGNVRQ 351

Query: 364 LRNAAERYVL-----LGKLAQFAES-HEPKSKLL-----GLNEQVAEFEKSLLEQTLIEC 412
           L N AER VL      G +A    S HE    ++      L E V  FE+ L++ T+   
Sbjct: 352 LINIAERAVLQSRRGSGTIASLLMSDHEDMQPVMTTEGKPLKEYVEAFERMLIDNTMRRH 411

Query: 413 GGSIKATMERLHLPRKTLYDKMQKYQLDKESY 444
            GSI + M+ L LPR+TL +KM KY L +  Y
Sbjct: 412 KGSIASVMDELCLPRRTLNEKMAKYGLQRSDY 443