Pairwise Alignments

Query, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  453 bits (1165), Expect = e-132
 Identities = 234/436 (53%), Positives = 308/436 (70%), Gaps = 1/436 (0%)

Query: 4   VFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLSGQN 63
           V L++D+ D+R+   Q+ +L D+      S E+A   +  +  P ++VSDI LPG+ G  
Sbjct: 9   VLLVEDDPDVRLGCEQALQLEDIPVSSVDSAEKARRRL-TRDFPGIVVSDIRLPGMDGMA 67

Query: 64  LLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEKRRL 123
           LL  +   D ELPV+LITGHGD+S+AV+AM  GA+DFIEKPF+P+ L++ V RA++KRRL
Sbjct: 68  LLKELQAIDPELPVVLITGHGDVSLAVQAMKGGAHDFIEKPFSPDYLVEVVRRALDKRRL 127

Query: 124 TLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKELVAR 183
           TLE RQL+  L+   TL  R+IG + A+  +R  +A + ++ ADIL+FGETGTGKEL AR
Sbjct: 128 TLEVRQLRARLESRDTLEARLIGRSPAMVKVRQLVADLGNSAADILIFGETGTGKELAAR 187

Query: 184 SLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTLFLD 243
            LHE   RR  NFVAINCG +PE L ESE++GHE GA+TGA  +R+GK EHA GGTLFLD
Sbjct: 188 CLHEAGPRRNGNFVAINCGGLPETLFESEIFGHEAGAYTGAAKKRIGKIEHASGGTLFLD 247

Query: 244 EIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQDLYY 303
           EIESMPM  QI+LLRVLQER +ER+GSN  IP+D RVIAATK DLK+ + +G+FR DLYY
Sbjct: 248 EIESMPMAMQIKLLRVLQERSLERLGSNTPIPVDCRVIAATKADLKELSDQGRFRADLYY 307

Query: 304 RLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGNVRE 363
           RLN+ TL +PPLRERREDIP LF HFLL AAAR+ +   A   + +  LL++DWPGNVRE
Sbjct: 308 RLNVATLPLPPLRERREDIPLLFEHFLLQAAARHERPVPAADPARMGPLLAYDWPGNVRE 367

Query: 364 LRNAAERYVLLGKLAQFAESHEPKSKLLGLNEQVAEFEKSLLEQTLIECGGSIKATMERL 423
           LRN A+R VL  +      + E  ++   L E V  FE++L+ + L    GS+  T E L
Sbjct: 368 LRNVADRCVLGIEAGVAPFTAESPTQKRSLAETVDSFERALITEALERNQGSLARTAEDL 427

Query: 424 HLPRKTLYDKMQKYQL 439
            + + TL+DK++KY L
Sbjct: 428 RIAKTTLHDKIRKYGL 443