Pairwise Alignments

Query, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  310 bits (793), Expect = 8e-89
 Identities = 176/454 (38%), Positives = 260/454 (57%), Gaps = 15/454 (3%)

Query: 1   MCDVFLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLS 60
           M ++ L+DD++DI   LA     A    +   S E+AL+  +AQ  P ++++D+ + G+ 
Sbjct: 1   MAELLLVDDDADILKLLALRLATAGHRVRTADSGEQALVMFQAQR-PQLVITDLKMGGMD 59

Query: 61  GQNLLSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEK 120
           G  L   +  +   LPVI++T HG I  AV A   G + F+ KPF  + L++ V +A+  
Sbjct: 60  GLALFDEIQRRAPTLPVIVLTAHGTIPEAVDATRRGVFGFLTKPFDGKALLEQVEQALRL 119

Query: 121 RRLTLENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKEL 180
                +        +        ++G + A+Q L +    VA + A + + G +GTGKEL
Sbjct: 120 ASPAGQGGGENEPWRAD------LVGGSPAMQELLERARLVAASDASVFIAGASGTGKEL 173

Query: 181 VARSLHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTL 240
           +AR++H  S R ++ FVAINC A+PENL+ESEL+GH KGAFTGA     G F  A GGT+
Sbjct: 174 LARAIHLASPRADKPFVAINCAAIPENLLESELFGHRKGAFTGATYNHKGLFLEADGGTV 233

Query: 241 FLDEIESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQD 300
           FLDEI  MP+  Q +LLRVLQER +  +G+ + +P+D+RV++AT  DL +    G+FR+D
Sbjct: 234 FLDEIGDMPLSLQAKLLRVLQERQVRPVGATQAVPVDVRVVSATHRDLDELLKSGQFRED 293

Query: 301 LYYRLNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGN 360
           LYYRLN+V+L +P L ERREDIP L +HFL   A+RYGK  TA     +++L++  WPGN
Sbjct: 294 LYYRLNVVSLALPLLAERREDIPLLANHFLQRTASRYGKPVTAFAPDAMEALVTAPWPGN 353

Query: 361 VRELRNAAERYVLL----GKLAQFA----ESHEPKSKLLGLNEQVAEFEKSLLEQTLIEC 412
           VR+L+N  E+ V L    G L   A          S    L+E    FE+  L + L   
Sbjct: 354 VRQLQNVVEQAVALSPVSGGLVPAALIQGALRSGDSAFTSLDEAKKVFERDYLVRLLRLT 413

Query: 413 GGSIKATMERLHLPRKTLYDKMQKYQLDKESYKP 446
            GS+          R   Y  ++++QLD + +KP
Sbjct: 414 EGSVTQAARLAQRNRTEFYKLLERHQLDAKQFKP 447