Pairwise Alignments

Query, 446 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., nitrogen assimilation regulatory protein from Klebsiella michiganensis M5al

 Score =  292 bits (748), Expect = 1e-83
 Identities = 159/362 (43%), Positives = 226/362 (62%), Gaps = 6/362 (1%)

Query: 5   FLIDDESDIRIALAQSFELADLNAQFFASVEEALLAIKAQGLPLVIVSDICLPGLSGQNL 64
           +++DD+S IR  L ++   A L+   F S  E L A+  +  P V++SDI +PG+ G  L
Sbjct: 7   WIVDDDSSIRWVLERALTGAGLSCTTFESGNEVLDALTTK-TPDVLLSDIRMPGMDGLAL 65

Query: 65  LSSVLHQDSELPVILITGHGDISMAVKAMHDGAYDFIEKPFAPERLIDTVHRAIEKRRLT 124
           L  +  +   LPVI++T H D+  AV A   GA+D++ KPF  +  +  V RAI      
Sbjct: 66  LKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVDRAISH---- 121

Query: 125 LENRQLKRSLKVSQTLGPRIIGETAAIQTLRDTIAQVADTQADILLFGETGTGKELVARS 184
            + +Q  R+  ++      IIGE  A+Q +   I +++ +   +L+ GE+GTGKELVA +
Sbjct: 122 YQEQQQPRNAPINSPTAD-IIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHA 180

Query: 185 LHEQSSRREQNFVAINCGAVPENLIESELYGHEKGAFTGADSRRVGKFEHAQGGTLFLDE 244
           LH  S R +  F+A+N  A+P++LIESEL+GHEKGAFTGA++ R G+FE A GGTLFLDE
Sbjct: 181 LHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQADGGTLFLDE 240

Query: 245 IESMPMQAQIRLLRVLQERVIERIGSNELIPLDIRVIAATKIDLKQAAAEGKFRQDLYYR 304
           I  MP+  Q RLLRVL +    R+G    + +D+R+IAAT  +L+    EGKFR+DL++R
Sbjct: 241 IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLELRVQEGKFREDLFHR 300

Query: 305 LNIVTLTIPPLRERREDIPALFHHFLLVAAARYGKAATALTASDVQSLLSHDWPGNVREL 364
           LN++ + +PPLRERREDIP L  HFL +AA   G  A  L      +L    WPGNVR+L
Sbjct: 301 LNVIRVHLPPLRERREDIPRLARHFLQIAARELGVEAKQLHPETEMALTRLAWPGNVRQL 360

Query: 365 RN 366
            N
Sbjct: 361 EN 362