Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., Signal transduction histidine kinase regulating C4-dicarboxylate transport system (EC 2.7.13.3) from Pseudomonas fluorescens FW300-N2E2

 Score =  279 bits (713), Expect = 3e-79
 Identities = 191/579 (32%), Positives = 303/579 (52%), Gaps = 27/579 (4%)

Query: 32  QALLNEHQSQLDRFSSHIVATLDKYAHIPHLISKDKELVDALLSAQNSAQIDITNRYLEQ 91
           + L    + QL+  +  + + + KY ++P L+  +   V  LL         I N YLE 
Sbjct: 52  RGLAENGERQLELHARAVESEISKYTYLPSLLELESS-VSQLLDDPTPEHRKIVNEYLEG 110

Query: 92  VNEVIQAADTYLIDRFGNTIASSNWNLDRSFIGRNFAWRPYFYLSIAGQKSQYFALGSTS 151
           +N   ++   Y++D  G  +A+SNW    S++G + ++R YF  ++ GQ  +++ +GST+
Sbjct: 111 LNRRSRSRAIYVMDTTGRVMATSNWRDVDSYLGEDLSFRAYFQNAVRGQPGRFYGIGSTN 170

Query: 152 GQRGYYYAYPVIYAAEILGVIVVKMDLSAIEQGWQSKSSYFVATDDHQVVFMSSQPAWLF 211
           G+ GYY A+ +    +I+GV VVK+ L A+E+ WQ        +D++ ++ +SS PA   
Sbjct: 171 GEPGYYLAHGLEQQGKIIGVAVVKVRLEALEERWQRARLEAFVSDENGIIILSSDPARRL 230

Query: 212 HSVADLSPAQLNDIRQSQQYLDSPIPSLG--WQGDLQAEQSEWRKPEKHWLQDD-----Y 264
            SV  LS      + +S QY   P+  L    +  L     +   P    L  D     Y
Sbjct: 231 KSVRPLSDDTKERLARSLQYYWFPLNELVPLARERLAEGMEKLTFPANSELVSDERAISY 290

Query: 265 IVSSRPLPELALTIRVLSPKIELFWSAFGLVIILCMLFAIVYLGFQLWHHRQ----LRQR 320
           +  +RPL +      +L+P  +L   A    I++ + FA+V      W+ R+     R  
Sbjct: 291 LSQTRPLSDTPWNFTLLTPLEDLRRQAINQGILVAVAFALVAFLLIAWNERRKVIATRLA 350

Query: 321 QIEQLQQETKQKLEFEVMERTAKLHA-------EIAERIKTEHALRQTQDELIQAAKLAV 373
             E LQQ   Q LE  + ERT  L A       +I ER + E  LR+ QDEL+QA KLA 
Sbjct: 351 AREALQQANNQ-LERRITERTTDLRASNERLKGQIRERRQAEETLRRAQDELVQAGKLAA 409

Query: 374 LGQMSASISHELNNPLAAIRSFADNGRRFLATNKPERAEENLSRISALTERMAKISEQLK 433
           +GQMS SI+HELN PLAA+R+ + N  RFL   + + A  NL  I+ L +RM +I+  L+
Sbjct: 410 IGQMSTSIAHELNQPLAALRTLSGNTVRFLERGQLDIASANLKTINDLIDRMGRITASLR 469

Query: 434 SFARKSTSNEQQDVQLYPLILSAKELMTGQFKAQMTLLELCDLETPVWVRVNPIQLEQVL 493
           SFAR+   ++Q    L   + +A +L+  + ++    +++      V V+++  +LEQ+L
Sbjct: 470 SFARR--GDDQGQASLGNGVEAALQLLGARLES--LNIQIHSSFDDVQVQIDQTRLEQIL 525

Query: 494 INLLTNALQALEGQAERVVQIRLQTSEQQIALFVDDNGPGVGIETLPHLFEPFHTTK--K 551
           +NL+ NAL A++ Q E  + +  Q  + +  L V DNG G+  E   HLFEPF TTK  +
Sbjct: 526 VNLIGNALDAMQTQPEPQLWLEGQAGDGKYRLRVRDNGHGIDPEARKHLFEPFFTTKPGE 585

Query: 552 NGLGLGLSISQQILHSMQGTLSVATSPLG-GARFTITLP 589
            GLGLGL++S  +  +  G L V     G G  F ++LP
Sbjct: 586 QGLGLGLTLSASLAAATGGYLGVEHPVEGSGTTFVLSLP 624