Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 588 a.a., C4-dicarboxylate transport sensor protein from Pseudomonas fluorescens FW300-N2E2

 Score =  278 bits (711), Expect = 5e-79
 Identities = 193/603 (32%), Positives = 320/603 (53%), Gaps = 39/603 (6%)

Query: 1   MPSIRRLSLMLWVMFIVL-VSMSTHLYWRFQYQALLNEHQS----QLDRFSSHIVATLDK 55
           +P+ R L L L+ + I+   +++  L  R   +  L E  S    QL  +++ +   +++
Sbjct: 2   LPTTRTLRLSLYTLLILTGAAVAATLAVRHAERVALEEDASRANQQLALYANSLHTLIER 61

Query: 56  YAHIPHLISKDKELVDALLSAQNSAQIDITNRYLEQVNEVIQAADTYLIDRFGNTIASSN 115
           Y  +P +++ D EL  AL     +AQ D+ NR LE++N   Q++   L+D  G  +A+SN
Sbjct: 62  YRALPAVLALDPELRSALKGPVGAAQQDVLNRKLERINGAAQSSTLELLDHTGLAVAASN 121

Query: 116 WNLDRSFIGRNFAWRPYFYLSIAGQKSQYFALGSTSGQRGYYYAYPVI-YAAEILGVIVV 174
           W L  S++G N+ +RPYF  +      +++A+G TSG  GY+ +  V     E LG +VV
Sbjct: 122 WRLPSSYVGHNYGFRPYFLQTRTQGTGRFYAVGVTSGIPGYFLSSAVTDDNGEFLGAMVV 181

Query: 175 KMDLSAIEQGWQSKSSYFVATDDHQVVFMSSQPAWLFHSVADLSPAQLNDIRQSQQYLDS 234
           K++   +E+ W+  S   + +D   ++F++++P W +  +  LS +   +++ ++QY   
Sbjct: 182 KLEFPELEREWRQGSDTLLVSDARSIIFIANRPGWRYRHLQPLSDSDRAELKATRQYDKQ 241

Query: 235 PIPSLGWQGDLQ-AEQSEWRKPEKHWLQDDYIVSSRPLPELALTIRVLSPKIELFWSA-- 291
           P+  L ++   +  + S   + E      +Y+  S PL     T+ +L      F     
Sbjct: 242 PLQPLAYETLRRFDDNSHLARVETPDGAAEYLWESLPLTAEGWTLHLLRRPQIAFEDRRN 301

Query: 292 FGLVII---LCMLFAIVYLGFQLWHHRQLRQRQIEQLQQETKQKLEFEVMERTAKLHAEI 348
            GL      L ++F +++L  Q W   +LRQR        ++++LE  V ERT       
Sbjct: 302 AGLAAAGSWLALVFLLLFLN-QRWRLARLRQR--------SREELERLVEERT------- 345

Query: 349 AERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRRFLATNKP 408
                    LR  QD L+Q+AKLA LGQMSA+++HE+N PL A R      R  L   + 
Sbjct: 346 -------RDLRTAQDGLVQSAKLAALGQMSAALAHEINQPLTAQRMQLATLRLLLDHGRV 398

Query: 409 ERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKELMTGQFKAQM 468
           + A + L  +  +  RMA ++  LK+FARKS S  ++ + L  ++  A +L+  + + + 
Sbjct: 399 DDAYKALKPVDDMLTRMAALTGHLKTFARKSPSGLRERLDLAAVVDQALQLLDTRLRDEQ 458

Query: 469 TLLELCDLETPVWVRVNPIQLEQVLINLLTNALQALEGQAERVVQIRLQTSEQQIALFVD 528
            +  +  L  P WVR + I+LEQVLINLL NAL A+  Q  + +++RL+  EQ   L V 
Sbjct: 459 -ISTVLHLTRPAWVRGDAIRLEQVLINLLRNALDAMAEQPIKRLEVRLEADEQLWRLTVS 517

Query: 529 DNGPGVGIETLPHLFEPFHTTKK--NGLGLGLSISQQILHSMQGTLSVATSPLGGARFTI 586
           D+G G+  E L  +F+PF TTK   +GLGLGL++S  I+H   G L+ A +   GA F +
Sbjct: 518 DSGTGIAEEHLAQVFDPFFTTKAVGDGLGLGLAVSFAIIHESGGRLT-ADNHEHGAVFCV 576

Query: 587 TLP 589
           TLP
Sbjct: 577 TLP 579