Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2E3

 Score =  283 bits (724), Expect = 2e-80
 Identities = 192/617 (31%), Positives = 318/617 (51%), Gaps = 31/617 (5%)

Query: 2   PSIRRLSLMLWVMFIVLVSMSTHLYW---RFQYQALLNEHQSQLDRFSSHIVATLDKYAH 58
           P + R   +  ++ +++V +    +W    +  ++L    Q QL+  +  + + + KY +
Sbjct: 19  PRLIRQLFLPPLIILLMVGLGYLGFWVSEHYGIRSLSENGQRQLELHARAVESEISKYTY 78

Query: 59  IPHLISKDKELVDALLSAQNSAQIDITNRYLEQVNEVIQAADTYLIDRFGNTIASSNWNL 118
           +P L+  +   V  LL           N YLE +N   ++   Y++D  G  +A+SNW  
Sbjct: 79  LPSLLELESS-VSELLGDPTPEHRQAVNNYLEGLNRRSRSRAIYVMDTTGRVLATSNWRD 137

Query: 119 DRSFIGRNFAWRPYFYLSIAGQKSQYFALGSTSGQRGYYYAYPVIYAAEILGVIVVKMDL 178
             S++G + ++R YF  ++ GQ  +++ +GST+G+ GYY A+ +    +I+GV VVK+ L
Sbjct: 138 VDSYLGEDLSFRAYFQNAVRGQPGRFYGIGSTNGEPGYYLAHGLEEQGKIIGVAVVKVRL 197

Query: 179 SAIEQGWQSKSSYFVATDDHQVVFMSSQPAWLFHSVADLSPAQLNDIRQSQQYLDSPIPS 238
            A+E+ WQ        +D++ ++ +SS PA    SV  LS      + +S QY   P+  
Sbjct: 198 EAMEERWQRARLEAFVSDENGIIILSSDPARRLKSVRPLSDDTKERLARSLQYYWYPLNE 257

Query: 239 LG--WQGDLQAEQSEWRKPEKHWLQDD-----YIVSSRPLPELALTIRVLSPKIELFWSA 291
           L    +  L     +   P    L  D     Y+  +R L +      +L+P  +L   A
Sbjct: 258 LEPLARERLSEGVEKITFPANAELVSDEQEISYLSQTRVLSDTPWNFTLLTPLGDLRREA 317

Query: 292 FGLVIILCMLFAIVYLGFQLWHHRQ---LRQRQIEQLQQETKQKLEFEVMERTAKLHA-- 346
               I++ + FA+V      W+ R+     +    +  QE   +LE  + ERT  L A  
Sbjct: 318 INQGILVAVAFALVAFLLIAWNERRKVIATRLAAREALQEANNQLERRITERTTDLRASN 377

Query: 347 -----EIAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRR 401
                +I ER + E  LR+ QDEL+QA KLA +GQMS SI+HELN PLAA+R+ + N  R
Sbjct: 378 ERLKSQIRERRQAEETLRRAQDELVQAGKLAAIGQMSTSIAHELNQPLAALRTLSGNTVR 437

Query: 402 FLATNKPERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKELMT 461
           FL   + + A  NL  I+ L +RM +I+  L+SFAR+   ++Q    L   + +A +L+ 
Sbjct: 438 FLERGQLDIASANLKTINDLIDRMGRITASLRSFARR--GDDQGQASLGKAVDAALQLLG 495

Query: 462 GQFKAQMTLL--ELCDLETPVWVRVNPIQLEQVLINLLTNALQALEGQAERVVQIRLQTS 519
            + ++   LL  E  D++    V+++  +LEQ+L+NL+ NAL A++ Q    + +     
Sbjct: 496 ARLESARLLLHREFSDVQ----VQIDQTRLEQILVNLIGNALDAMQAQPLPELWLEGDIV 551

Query: 520 EQQIALFVDDNGPGVGIETLPHLFEPFHTTK--KNGLGLGLSISQQILHSMQGTLSVATS 577
           + +  L V DNG G+  E   HLFEPF TTK  + GLGLGL++S  +  +  G L V   
Sbjct: 552 DGKYRLRVRDNGHGINAEARKHLFEPFFTTKPGEQGLGLGLTLSASLAAATGGHLGVEHP 611

Query: 578 PLGGARFTITLPRFTPL 594
             GG  F ++LP  +P+
Sbjct: 612 ASGGTAFVLSLPLVSPV 628