Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., Signal transduction histidine kinase regulating C4-dicarboxylate transport system (EC 2.7.13.3) from Pseudomonas fluorescens FW300-N1B4

 Score =  290 bits (741), Expect = 2e-82
 Identities = 189/581 (32%), Positives = 307/581 (52%), Gaps = 24/581 (4%)

Query: 32  QALLNEHQSQLDRFSSHIVATLDKYAHIPHLISKDKELVDALLSAQNSAQIDITNRYLEQ 91
           ++L    Q QL+  +  + + + KY ++P L+  +   V  LL+  +       N YLE 
Sbjct: 52  RSLSENGQRQLELHARAVESEISKYTYLPSLLELESS-VSKLLADPSPELRQTVNEYLEG 110

Query: 92  VNEVIQAADTYLIDRFGNTIASSNWNLDRSFIGRNFAWRPYFYLSIAGQKSQYFALGSTS 151
           +N   ++   Y++D  G  +A+SNW    S++G + ++R YF  ++ GQ  +++ +GSTS
Sbjct: 111 LNRRSRSRAIYVMDTTGRVLATSNWRDVDSYLGEDLSFRAYFQNAVRGQPGRFYGIGSTS 170

Query: 152 GQRGYYYAYPVIYAAEILGVIVVKMDLSAIEQGWQSKSSYFVATDDHQVVFMSSQPAWLF 211
           G+ GYY A+ +    +I+GV VVK+ L A+E+ WQ        +D++ ++ +SS PA   
Sbjct: 171 GEPGYYLAHGLEEHGKIIGVAVVKVRLEAMEERWQRARLEAFVSDENGIIILSSDPARRL 230

Query: 212 HSVADLSPAQLNDIRQSQQYLDSPIPSLG--WQGDLQAEQSEWRKPEKHWLQDD-----Y 264
            SV  LS      + +S QY   P+  L    +  L   + +   P    L  D     Y
Sbjct: 231 KSVVPLSEETKEKLARSLQYYWFPLNELQPLAREKLAEGEEKLTFPANSELMSDEENISY 290

Query: 265 IVSSRPLPELALTIRVLSPKIELFWSAFGLVIILCMLFAIVYLGFQLWHHRQ---LRQRQ 321
           +  +RPL +      +L+P  +L   A    I++ + FA+V      W+ R+     +  
Sbjct: 291 LSQTRPLSDTPWNFTLLTPLQDLRREAINQGILVAVAFALVAFLLIAWNERRKVIATRLA 350

Query: 322 IEQLQQETKQKLEFEVMERTAKLHA-------EIAERIKTEHALRQTQDELIQAAKLAVL 374
             +  QE   +LE  + ERT  L A       +I ER + E  LR+ QDEL+QA KLA +
Sbjct: 351 AREALQEANNQLERRITERTTDLRASNERLKGQIRERRQAEETLRRAQDELVQAGKLAAI 410

Query: 375 GQMSASISHELNNPLAAIRSFADNGRRFLATNKPERAEENLSRISALTERMAKISEQLKS 434
           GQMS SI+HELN PLAA+R+ + N  RFL   + + A  NL  I+ L +RM +I+  L+S
Sbjct: 411 GQMSTSIAHELNQPLAALRTLSGNTVRFLERGQLDVASTNLKTINELIDRMGRITASLRS 470

Query: 435 FARKSTSNEQQDVQLYPLILSAKELMTGQFKAQMTLLELCDLETPVWVRVNPIQLEQVLI 494
           FAR+   +++        + +A +L+  + ++    L   DLE  V V+++  +LEQ+L+
Sbjct: 471 FARR--GDDKGQASFGKAVDAALQLLGSRMESAHLQLHR-DLE-DVQVQIDQTRLEQILV 526

Query: 495 NLLTNALQALEGQAERVVQIRLQTSEQQIALFVDDNGPGVGIETLPHLFEPFHTTK--KN 552
           NL+ NAL A++ Q +  + +  +  + +  L V DNG G+  E   HLFEPF TTK  + 
Sbjct: 527 NLIGNALDAMQSQPQPELWLEAEEFDGKYRLRVRDNGHGIDAEARKHLFEPFFTTKPGEQ 586

Query: 553 GLGLGLSISQQILHSMQGTLSVATSPLGGARFTITLPRFTP 593
           GLGLGL++S  +  +  G L V     GG  F ++LP  +P
Sbjct: 587 GLGLGLTLSASLAAATGGHLGVEHPASGGTTFVLSLPLVSP 627