Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., Signal transduction histidine kinase regulating C4-dicarboxylate transport system from Pseudomonas stutzeri RCH2

 Score =  306 bits (784), Expect = 2e-87
 Identities = 208/605 (34%), Positives = 320/605 (52%), Gaps = 37/605 (6%)

Query: 2   PSIRRLSLMLWVMFIVLVSMSTHLYWRFQYQALLNEHQSQLDRFSSHIVATLDKYAHIPH 61
           P  R L+L+  ++  +L  +   L  R+    L  +++  LD + ++++ TL++Y  +P 
Sbjct: 10  PRWRNLALLALLLAPLLWPLQ-QLAERYYRNELTEQNRQTLDLYVANLLGTLNRYEVLPR 68

Query: 62  LISKDKELVDALLSAQNSAQIDITNRYLEQVNEVIQAADTYLIDRFGNTIASSNWNLDRS 121
           ++  D   + A+L   +    D  NR L+++     A   YL+   GNT+A+SNW+ + S
Sbjct: 69  ILG-DLPALRAVLQQDSPQVRDNANRLLKRLRNQTGADVIYLMGTDGNTLAASNWDEEDS 127

Query: 122 FIGRNFAWRPYFYLSIAGQKSQYFALGSTSGQRGYYYAYPVIYAAEILGVIVVKMDLSAI 181
           F+ RNFA+RPYF  ++ G+  ++F LG+TSG+RGYY+   V    ++LGV+VVK+DL   
Sbjct: 128 FVDRNFAFRPYFRQAMEGRLGRFFGLGTTSGKRGYYFGAAVRDGDQVLGVLVVKVDLDHT 187

Query: 182 EQGWQSKSSYFVATDDHQVVFMSSQPAWLFHSVADLSPAQLNDIRQSQQYLDSPIPSLGW 241
           E  W S     + TD+  VV ++S+P W F +   L   +     + Q   D P P+L +
Sbjct: 188 ETLWGSTPEQLLVTDNFGVVILTSRPEWRFRATRGLGVDE-----REQIAFDQPYPTL-Y 241

Query: 242 QGDLQAEQSEWRKPEKHWLQDDYIVSSRPLPELALTIRVLSPKIELFWSAFGLVIIL--- 298
             DL      W            ++ SR L E   T+R+L+P + L       V+ +   
Sbjct: 242 PQDLTLNIDAW------------LIQSRELKETGWTVRILAP-VNLVERPVRTVVAIGAA 288

Query: 299 CMLFAIVYLGFQLWHHRQLRQRQIEQLQQETKQKLEFEVMERT-------AKLHAEIAER 351
            +L  +++LG  +   R   +R    L  + +Q+LE  V+ERT       ++L  E+ ER
Sbjct: 289 TLLALLLWLGLLMQRRRHFLERL--ALDAQARQQLEQRVLERTRDLEALNSRLKVEVLER 346

Query: 352 IKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRRFLATNKPERA 411
            + +  L + QDEL+QA KL+ LG MSASISHELN PLAAIRS+ADN    L   +   A
Sbjct: 347 EQAQQELVRAQDELLQAGKLSALGTMSASISHELNQPLAAIRSYADNAGVLLDHQRNAEA 406

Query: 412 EENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKELMTGQFKAQMTLL 471
            +NL  IS LT RMA I   L++FAR+   +  + V L P +  A  L+  + +A    L
Sbjct: 407 RDNLRLISELTARMASIIAHLRAFARRD-QHAPERVALQPALDDALALLAKRRQAMGVEL 465

Query: 472 ELCDLETPVWVRVNPIQLEQVLINLLTNALQAL-EGQAERVVQIRLQTSEQQIALFVDDN 530
                E  +WV+    +L Q+L NLL NAL AL E    R + +R +     + L + DN
Sbjct: 466 IRDLPEATLWVQAGETRLRQILANLLANALDALTERPPPRRIWLRAEQQGDGVLLSLRDN 525

Query: 531 GPGVGIETLPHLFEPFHTTKKN--GLGLGLSISQQILHSMQGTLSVATSPLGGARFTITL 588
           GPG   E L    EPF TTK +  GLGLGL+I   +  ++ G L ++  P GGA+ ++ L
Sbjct: 526 GPGFSDEALQRAREPFFTTKTSAQGLGLGLAICDTLTRALGGELRMSNHPEGGAQLSLFL 585

Query: 589 PRFTP 593
               P
Sbjct: 586 RSAEP 590