Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  329 bits (844), Expect = 2e-94
 Identities = 198/549 (36%), Positives = 315/549 (57%), Gaps = 21/549 (3%)

Query: 53  LDKYAHIPHLISKDKELVDALLSAQNSAQIDITNRYLEQVNEVIQAADTYLIDRFGNTIA 112
           L++Y  +P LI+   ++ + +   ++       N YL+++NE+++++D Y+I   GNTIA
Sbjct: 54  LNRYQALPALIADHDDVKELVTRPRDRRLRGAVNSYLKEINELLKSSDIYVITPDGNTIA 113

Query: 113 SSNWNLDRSFIGRNFAWRPYFYLSIAGQKSQYFALGSTSGQRGYYYAYPVIYAAEILGVI 172
           +SN++   SF+G NF++RPYF  ++ G +S+++ALG+TS +RGYY+  PV    EI GVI
Sbjct: 114 ASNYDGPTSFVGENFSYRPYFQDALKGDQSRFYALGTTSLKRGYYFGAPVRVGGEIRGVI 173

Query: 173 VVKMDLSAIEQGWQSKSSYFVATDDHQVVFMSSQPAWLFHSVADLSPAQLNDIRQSQQYL 232
           V K+D+  IE  WQ        +D   ++FMS  PAWL+  +  L+P +L     S++Y 
Sbjct: 174 VFKVDIETIEASWQGGEYRIFVSDPEGIIFMSGNPAWLYAGILPLTPDRLARTEGSRRYA 233

Query: 233 DS---PIPSLGWQGDLQAEQSEWRKPE-KHWLQDDYIVSSRPLPELALTIRVLSPKIELF 288
           D+   P+P+      +Q+E S  R        + +Y+  S  +PE   T+ VL+    + 
Sbjct: 234 DARLRPLPA------VQSELSGHRLLRVSEGSEREYLALSHYMPEADWTVNVLTDTASVR 287

Query: 289 WSAFGLVIILCMLFAIVYLGFQLWHHRQLRQRQIEQLQQETKQKLEFEVMERTA------ 342
             A   V  + +L  +  L   +   R+ R R+   +Q++ +++LE  V ERTA      
Sbjct: 288 TQALTTVAAVMLLLCLAALAIAIIIQRRTRLRERILMQEQAQEELERRVEERTADLARVN 347

Query: 343 -KLHAEIAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRR 401
            ++ AEIAER  TE  LRQTQ +LIQA KLA LGQMSA++SHE N PLAA +++AD+   
Sbjct: 348 SQIEAEIAERRLTEQQLRQTQADLIQAGKLAGLGQMSAALSHEFNQPLAAAKTYADSAAL 407

Query: 402 FLATNKPERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKELMT 461
            +   +   A +N+ RIS L +RMA IS  L++FARK  + +   V+L  ++    E++ 
Sbjct: 408 LIERGRTAEASDNIRRISGLIDRMASISRHLRNFARK-PNEKLGPVRLDEVVRDTLEIVE 466

Query: 462 GQFKAQMTLLELCDLETPVWVRVNPIQLEQVLINLLTNALQALEGQAERVVQIRLQTSEQ 521
            + KA    +++ D+   + V    ++L+QVL+N+++NA  A+EG  +R + +R      
Sbjct: 467 TRLKAAGAEMDI-DIGDELAVLAGSVRLQQVLVNVISNAADAVEGLDDRKLSVRAWREGG 525

Query: 522 QIALFVDDNGPGVGIETLPHLFEPFHTTK--KNGLGLGLSISQQILHSMQGTLSVATSPL 579
           +  L V D G GV       +F+PF+TTK    GLGLGLSIS  I+    G+L+V+    
Sbjct: 526 RAVLTVRDRGAGVAPAVAQRIFDPFYTTKGVGRGLGLGLSISYNIIKDFGGSLTVSNHSE 585

Query: 580 GGARFTITL 588
           GGA F I L
Sbjct: 586 GGAVFRIEL 594