Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

 Score =  110 bits (275), Expect = 2e-28
 Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 11/240 (4%)

Query: 337 VMERTAKLHAEIAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFA 396
           V++RT  L  EI +  +T+ A  + Q +  +A ++ + G+M++ ISHEL  PLA IR  A
Sbjct: 339 VVKRTRALETEIEQHRETQRAFNEQQRQFYRAQRVLLTGEMASGISHELKQPLAGIRYLA 398

Query: 397 DNGRRFLATNKPERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLY---PLI 453
                 L  N+PE A   L  +    +R  +   +L+SF ++ + +    V       L 
Sbjct: 399 QGCLYRLKDNEPEIASA-LGGVLTQVDRAQETISRLRSFCQQPSRSVPYRVDTLIEETLA 457

Query: 454 LSAKELMTGQFKAQMTLLELCDLETPVWVRVNPIQLEQVLINLLTNALQALEGQAERVVQ 513
           L + EL   + +  + L E       V  R++P  + QVL+N+L NAL A+ GQ    + 
Sbjct: 458 LISPELKRLKLEPSLALTE-------VEARLDPGLMTQVLVNVLLNALDAMAGQPTPWLG 510

Query: 514 IRLQTSEQQIALFVDDNGPGVGIETLPHLFEPFHTTKKNGLGLGLSISQQILHSMQGTLS 573
           I L+  +    + V DNG G+    L  LF PF + K +GLGLG+ I ++I+    G +S
Sbjct: 511 IALEAKDSDYLIRVSDNGCGLTEAQLSRLFFPFESAKADGLGLGMVICKRIVEEHGGKIS 570