Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., sensor histidine kinase (RefSeq) from Shewanella amazonensis SB2B

 Score =  128 bits (321), Expect = 9e-34
 Identities = 94/277 (33%), Positives = 146/277 (52%), Gaps = 9/277 (3%)

Query: 317 LRQRQIEQLQQETKQKLEFEVMERTAKLHAEIAERIKTEHALRQTQDELIQAAKLAVLGQ 376
           L QR+  Q+Q   +Q LE +V ERT  L  +  E  +    L +T+ +L+   KL  LG+
Sbjct: 412 LLQRRNAQIQSAAEQ-LELKVEERTRSLQEKTEELQRNVSLLNETRAQLVTNEKLTALGE 470

Query: 377 MSASISHELNNPLAAIRSFADNGRRFLATNKPERAEENLSRISALTERMAKISEQLKSFA 436
           ++A I+HE+NNP A I    +  R  L  +K  + EE +  +     R++ I   L  ++
Sbjct: 471 LTAGIAHEINNPTAVILGNMELLRSELG-DKAGQVEEEIDLVIQQVGRISTIIRSLLQYS 529

Query: 437 RKSTSNEQQDV-QLYPLILSAKELMTGQFKAQMTLLELCDLETPVWVRVNPIQLEQVLIN 495
           R    N   ++ Q+ P+I     L+    K Q  +L   +L     V++N  QL QVLIN
Sbjct: 530 RPGEFNAPLEMHQITPIIEEMLVLVRHSIKKQEVVLHQ-ELNASCPVQINRPQLLQVLIN 588

Query: 496 LLTNALQALEGQAE---RVVQIRLQTSEQQIALFVDDNGPGVGIETLPHLFEPFHTTKKN 552
           L+ NA  A++G+     R     +Q     + + ++D G G+  E L  +F+PF+TT+ +
Sbjct: 589 LVVNAAHAMDGKGRIWIRTYDWVVQDEPVGVKIEIEDEGCGIAPEQLGRIFDPFYTTRPD 648

Query: 553 GLGLGLSISQQILHSMQGTLSVATSPLG-GARFTITL 588
           G GLGLS+S  I+  + GT+ V TS LG G  FTI L
Sbjct: 649 GTGLGLSLSYGIIKRIGGTIEV-TSTLGKGTLFTIGL 684