Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 589 a.a., C4-dicarboxylate transport sensor protein DctB from Phaeobacter inhibens DSM 17395

 Score =  219 bits (559), Expect = 2e-61
 Identities = 181/609 (29%), Positives = 298/609 (48%), Gaps = 64/609 (10%)

Query: 2   PSIRRLSLMLWVMFIVLVSMSTHLYW--------RFQYQALLNEHQSQLDRFSSHIVATL 53
           P  R  S  + +  +VL++++    W        RF  ++  N  + +L  +S ++V+ L
Sbjct: 14  PRSRTTSWRVRLALLVLMAVAAVTVWVTNRALTDRFT-ESTRNRAELRLALYSGNLVSEL 72

Query: 54  DKYAHIPHLISKDKELVDALLSAQNSAQIDITNRYLEQVNEVIQAADTYLIDRFGNTIAS 113
            ++A +P L+++D+ L+ AL S   S     T R +  V E I AA   L+ + G T+A+
Sbjct: 73  GRHAIVPQLLARDQALISALQSNDFSLS---TQRLISFVEE-IGAASIMLMAQDGRTVAA 128

Query: 114 SNWNLDRSFIGRNFAWRPYFYLSIAGQKSQYFALGSTSGQRGYYYAYPVIYAAEILGVIV 173
           +    DR+ +G       YF  ++  + + + A+ +  G   + Y+  ++  + ILGVIV
Sbjct: 129 T----DRNRLGETHRNAAYFVDALRSKTTVFSAIRTEVGSYRFTYSRRIVDTSGILGVIV 184

Query: 174 VKMDLSAIEQGWQSKSSYFVATDDHQVVFMSSQPAWLFHSVADLSPAQLND------IRQ 227
           V++DL   E+ W   S   + +D    + ++++  W   S  D    Q  +      IR 
Sbjct: 185 VEVDLQKFERAWAGISDAVMVSDSTGTILLATESRWRGLSEEDALQLQTPEGAIQRAIRA 244

Query: 228 SQQYLDSPIPSLGWQGDLQAE---QSEWRKPEKHWLQDDYIV--SSRPLPELALTIRVLS 282
           +  +   P  +      LQ E   + E R P + W    +    S R      L + ++ 
Sbjct: 245 TTDWTALPADAY-----LQGEAVMRLESRIPFQGWRLTSFTTYASIRERVNTVLALEIM- 298

Query: 283 PKIELFWSAFGLVIILCMLFAIVYLGFQLWHHRQLRQRQIEQLQQETKQKLEFEVMERTA 342
                     G  I+L + F      + L     LR    +      ++  E  V+   A
Sbjct: 299 ----------GFAILLALAF------YALSRRTALRMALFQ------RESAELRVLN--A 334

Query: 343 KLHAEIAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRRF 402
           +L  EIAER + +  L   +  L Q++KLA LG+MSA++SHELN PLAA++++    R  
Sbjct: 335 RLQREIAERERMQETLAVAEQSLAQSSKLAALGEMSAAVSHELNQPLAAMKTYLAGARLL 394

Query: 403 LATNKPERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKELMTG 462
           L  N+PE A  +  RI  L ERM  I+ QLKS+ARK   +    V +   + S+  +M  
Sbjct: 395 LNRNRPEEALASFGRIDDLIERMGAITRQLKSYARKG-GDAFSPVNMGDALASSLSMMEP 453

Query: 463 QFKAQMTLLELCDLETPVWVRVNPIQLEQVLINLLTNALQALEGQAERVVQIRLQTSEQQ 522
           Q + +   +     E PV+V  + +++EQV++NLL NAL A +  A+  V+I L   E  
Sbjct: 454 QLRQRHVKIARILPEQPVYVMGDRMRIEQVMVNLLRNALDATKSVADPEVEILLAAGE-T 512

Query: 523 IALFVDDNGPGVGIETLPHLFEPFHTTKK--NGLGLGLSISQQILHSMQGTLSVATSPLG 580
             L V DN  G+GI+    LFEPF+TTK+  +G+GLGL+IS  I++ + G L+      G
Sbjct: 513 ATLSVRDN--GMGIKDFGSLFEPFYTTKQPGDGVGLGLAISSGIVNDLGGRLTARNGQNG 570

Query: 581 GARFTITLP 589
           GA F + LP
Sbjct: 571 GAVFEMQLP 579