Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 901 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  113 bits (282), Expect = 4e-29
 Identities = 83/255 (32%), Positives = 134/255 (52%), Gaps = 12/255 (4%)

Query: 343 KLHAEIAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLAAIRSFADNGRRF 402
           ++  +I ER + E    Q Q  L Q ++L  +G+M++S++HELN PLAAI ++     + 
Sbjct: 648 QIGTDITERKQIEEVNLQQQKRLEQTSRLITMGEMASSLAHELNQPLAAIANYCMGCVKR 707

Query: 403 L--ATNKPERAEENLSRISALTERMAKISEQLKSFARKSTSNEQQDVQLYPLILSAKELM 460
           +     KPE     + + S   ER  KI  +++ F +K+  N  Q V L  ++  A  L 
Sbjct: 708 MKGGAAKPEELLGAMEKASFQAERAGKIIRRMREFVKKNEPNRGQ-VLLGDIVEEA--LG 764

Query: 461 TGQFKAQMTLLELC-DL--ETPVWVRVNPIQLEQVLINLLTNALQALEGQ--AERVVQIR 515
             + +A+   + +C DL  E P  +  + I +EQVL+NL+ N ++A+     AER + + 
Sbjct: 765 FAEIEARKLGVNICVDLPPELPP-LFADRIMIEQVLLNLVKNGIEAMRDTLPAERRLTVS 823

Query: 516 LQTSEQQ-IALFVDDNGPGVGIETLPHLFEPFHTTKKNGLGLGLSISQQILHSMQGTLSV 574
               +   + + V D G G+G  T   LF PF+TTK  G+G+GL I + I+   +G L  
Sbjct: 824 ATLPDNHSLEVAVADRGHGLGSTTAEELFAPFYTTKPEGMGMGLPICRSIIEYHKGRLWA 883

Query: 575 ATSPLGGARFTITLP 589
             +P GG  F  TLP
Sbjct: 884 DANPGGGTVFRFTLP 898