Pairwise Alignments

Query, 597 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  113 bits (282), Expect = 2e-29
 Identities = 87/279 (31%), Positives = 145/279 (51%), Gaps = 28/279 (10%)

Query: 343 KLHAEIAERIKTEHALRQTQDELIQAAKLAVLGQMSASISHELNNPLA-------AIRSF 395
           +L     E  +T   L++TQ +L+ + K+A LG++ A ++HELNNP++       A++ +
Sbjct: 177 ELRRAYRELRQTHEDLKRTQQQLLHSEKMASLGRLVAGVAHELNNPISFVLGNVLALKRY 236

Query: 396 ADNGRRFLAT--NK-----PE----RAEENLSRI----SALTERMAKISEQLKSFA---R 437
           A     +L    N+     PE    R+E  + RI    S L + M + +E+ +      +
Sbjct: 237 AGRLETYLEAVHNRGCDCIPELEELRSELRIDRILEDMSPLIDGMIEGAERTRDIVDGLK 296

Query: 438 KSTSNEQQDVQLYPLILSAKELMTGQFK-AQMTLLELCDLETPVWVRVNPIQLEQVLINL 496
           + ++ +++  + + L    +  +    K A  +     +L   + +R +P QL+QV++NL
Sbjct: 297 RFSALDREAAERFNLAEVVQRAVRWVAKSAPPSFTVRTELPAELPLRGSPGQLQQVVMNL 356

Query: 497 LTNALQALEGQAERVVQIRLQTSEQQIALFVDDNGPGVGIETLPHLFEPFHTTKK--NGL 554
           + NALQA   Q    + I  +  ++++ L   DNGPG+  E L HLF+PF TTK    G 
Sbjct: 357 VQNALQATAAQPGGELLISGELGDRELRLIFHDNGPGIPDEALGHLFDPFFTTKPVGEGT 416

Query: 555 GLGLSISQQILHSMQGTLSVATSPLGGARFTITLPRFTP 593
           GLGLSIS  I+    G +  +  P GGA F +TLPR  P
Sbjct: 417 GLGLSISYGIVERHGGRIVASNHPEGGAVFRLTLPRDLP 455